Pairwise Alignments

Query, 274 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 263 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 46.2 bits (108), Expect = 7e-10
 Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 10/159 (6%)

Query: 30  RYVRCCL---LIIGLCPALLYAQSSPNAEDKLVRIASGEWPPFI--GSDLPNYGFVGEII 84
           R +RCCL   L+ G+   +L + ++    D L R+ +   PP++   S     G V +I+
Sbjct: 11  RAMRCCLASLLLAGVVLLVLPSWAAAQGADVL-RLVTEHQPPYVVVTSGGAVEGTVTDIV 69

Query: 85  TQAFTKQGYQVEFQFLPWARAYAETQRGLYDATAIWMHSAEREIDFFYSLPVSQEEFVFF 144
            +   + G     +  PW RA A T  G  D       S  R+I    S P++ + + + 
Sbjct: 70  RKVLQQMGVAFTIKPYPWKRAQAMTLSGHADGFFAASQSERRDISLVLSTPLAAQRWTWA 129

Query: 145 YPVKKPFDWKTLSDLAPYKLGGVLAYSYGKELDALLDSG 183
            P    F+  T + +A  ++        G  + A L+SG
Sbjct: 130 LPKDSSFEPGTAAFMAEARVSAF----KGSNMQAWLESG 164