Pairwise Alignments

Query, 274 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., extracellular solute-binding protein (RefSeq) from Shewanella sp. ANA-3

 Score = 50.4 bits (119), Expect = 4e-11
 Identities = 54/232 (23%), Positives = 103/232 (44%), Gaps = 18/232 (7%)

Query: 37  LIIGLCPALLYAQSSPNAEDKLVRIASGEWPPFIGSDLPNYGFVG-EIITQAFTKQGYQV 95
           ++  LCP        P   ++L+ + +     F  +    Y  +G +I+ +   +Q   +
Sbjct: 14  ILSSLCP--------PAQAEELLAVGTSFSQIFEQNAKGEYSGLGVDILNRFAEQQKVTI 65

Query: 96  EFQFLPWARAYAETQRGLYD-ATAIWMHSAEREIDFFYSLPVSQEEFVFFYPVKKPFDWK 154
            +Q  PW RA +  +RG  D     ++  A +++  F SL   +++ VF+     P  W 
Sbjct: 66  HYQLAPWRRAQSMVERGQADILIGPYISEARQKVLAFSSLAFYRDDIVFYARTHNPTPWD 125

Query: 155 -TLSDLAPYKLGGVLAYSYGKELDALLDSGVLTMERDGLAAKNLEKLAKGRVDLVPEEKH 213
              + +   ++G +  ++YG   +    S  LT+         +E+L++G +DL+     
Sbjct: 126 GNYASIRGLRIGKMQGWNYGYLFNERTKS--LTVNEFTDLKSGIERLSRGDLDLLASNVR 183

Query: 214 IGYYLINQ-QIPHLQDLITHHPTPFLTNSNYLLFPKQSARSQELLGVFNHYL 264
               L+ Q +IP  Q +    PT   T   ++ FPK  A+ Q LL  F+ +L
Sbjct: 184 NTQALLAQIKIP--QAIAPLSPT-IDTQDGFMAFPKY-AQFQPLLDSFDLFL 231