Pairwise Alignments

Query, 274 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score = 80.1 bits (196), Expect = 5e-20
 Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 4/224 (1%)

Query: 46  LYAQSSPNAEDKLVRIASGEWPPFIGSDLPNYGFVGEIITQAFTKQGYQVEFQFLPWARA 105
           L   S+P    + + + +  +PPF  ++LP+ G V  ++ +AF ++GY    +F P+ARA
Sbjct: 15  LLGLSTPCMAGRELTLVATNYPPFYTNELPDQGGVALVVKEAFKRRGYNASVKFYPFARA 74

Query: 106 YAETQRGLYDATAIWMHSAEREIDFFYSLPVSQEEFVFFYPVKKPFDWKTLSDLAPYKLG 165
               + G  D      +  ERE    YS P+   + VF+     P  +  L++L P+ +G
Sbjct: 75  ALLVKTGQADGIIGLWYRKEREQWAHYSDPIQAVQIVFYKRKDNPLSFSQLTELKPFTIG 134

Query: 166 GVLAYSYGKELDALLDSGVLTMERDGLAAKNLEKLAKGRVDLVPEEKHIGYYLINQQIPH 225
               Y+   E    +    LT E       NL+KL   R+DLV    ++  YLI Q    
Sbjct: 135 IGRGYANPPE----IAGAGLTTEEGNSDEMNLKKLFLKRIDLVLIGHNLAEYLIKQHGDE 190

Query: 226 LQDLITHHPTPFLTNSNYLLFPKQSARSQELLGVFNHYLVQTQK 269
             D       P  T   +L      +    L+  FN  L   +K
Sbjct: 191 YTDAFEQVGEPIATEVFHLGVSLAVSDQITLVAEFNKGLESMKK 234