Pairwise Alignments

Query, 274 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 275 a.a., extracellular solute-binding protein (RefSeq) from Shewanella sp. ANA-3

 Score = 56.6 bits (135), Expect = 6e-13
 Identities = 48/148 (32%), Positives = 69/148 (46%), Gaps = 16/148 (10%)

Query: 41  LCPALLYAQSSPNAED-------KLVRIASGEWPP--FIGSDLPNYGFVGEIITQAFTKQ 91
           LC +L YA  S  A D       K VR+ +  WPP  F    +P  GF  E++ Q  T+ 
Sbjct: 16  LCVSLGYAGISLAATDVATEAATKTVRLVTEAWPPMSFEQDGVPT-GFGVELVNQLQTRV 74

Query: 92  GYQVEFQFLPWARAYA---ETQRGLYDATAIWMHSAEREIDFFYSLPVSQEEFVFFYPVK 148
           G Q + + LPWARAY+    +   L  AT+I   S ERE  F +  P++  +   +    
Sbjct: 75  GQQEKIEVLPWARAYSIAHSSPNVLLFATSI---SDERESHFDFIGPIATSKITLYARAD 131

Query: 149 KPFDWKTLSDLAPYKLGGVLAYSYGKEL 176
            P     LS++    + GV   S G +L
Sbjct: 132 DPISINQLSEVNNAGIVGVYRESVGAQL 159