Pairwise Alignments

Query, 477 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 505 a.a., drug resistance transporter, EmrB/QacA family from Pseudomonas fluorescens FW300-N2E2

 Score =  255 bits (651), Expect = 3e-72
 Identities = 143/413 (34%), Positives = 227/413 (54%), Gaps = 9/413 (2%)

Query: 13  IFFTVFLPMFLAAVDQTLLATATPAIVRDLGNLQLSSWIAIGYMLASAASVPVYGWLGDQ 72
           +   + L +FL A+DQT++A + PAI     ++ L +W+  GYM+A   +VP+YG LGD 
Sbjct: 17  VLVALMLAIFLGALDQTIVAVSMPAISAQFADVSLLAWVISGYMVAMTVAVPIYGKLGDL 76

Query: 73  YGRKPMLMIALSIFALGSVICAFAMNMPWLVAGRIVQGLGSGGLMSLSQALIGELVPPRE 132
           YGR+P+++  + +F L S+ C  A +M  LV  RI QG+G+GG++S+SQA+IG+++PPRE
Sbjct: 77  YGRRPLMLFGMGLFTLASLFCGLAQDMEQLVLARIFQGIGAGGMISVSQAIIGDIIPPRE 136

Query: 133 RARFQGYFSSLFAVASIGGPVLGGVLVTYLSWQWLFWFNLPLVGIALYRLARFQFVQSSR 192
           R R+QGYFSS++AVAS+ GPVLGG +  YLSW+W+FW NLPL G+  + +AR   V    
Sbjct: 137 RGRYQGYFSSMYAVASVAGPVLGGYMTEYLSWRWVFWINLPL-GLVAWWVARRSLVGLPV 195

Query: 193 KSEAS-IDVAGLILFPSMMTLIIYWLSAGGHYFPWFSVTSISLVSAFVLTSLLFIAQQKR 251
                 ID  G +L    +T ++  ++  G    W S   + L+        +F   ++R
Sbjct: 196 PQRTPIIDYLGTVLLIIGLTALLLGITQVGQGHAWHSREVLGLLGCAGAALGVFAWHERR 255

Query: 252 VTASFLPLRLLARREIHIPLLSTFIFAACLFALIFFLPIFLQLGLRVNAAQSGLLLIPLS 311
                LP+ L A R+  +   + F  +    +L   +P+  Q      A  + L L+PL+
Sbjct: 256 AREPLLPMHLFANRDAVLCWCTVFFTSFQAISLTVLVPLRFQSVTGAGADSAALHLLPLA 315

Query: 312 CGIIGGAYTTGKVIAKTGVPKFLPVFGMSLSSCAFAVLAMFSLSAPVV----SAIAALCG 367
            G+  GAY  G+  + TG  ++ P+         FA+L M + + P      S    L G
Sbjct: 316 IGLPIGAYFAGRRTSVTG--RYKPMILSGALLFPFAILGM-ACTPPAALWLSSLFMLLSG 372

Query: 368 LGLGTVMPSTQVLVQTLAGKANLGRITAMASLSRSLGASVGTAFFGTLIYSLL 420
           +  G   P++ V  Q    + ++G  T+  +L R+LG +VG A    L+ +LL
Sbjct: 373 IASGMQFPTSLVGAQNAVHQQDIGVATSTTNLFRALGGAVGVALMSALLLALL 425