Pairwise Alignments

Query, 477 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 498 a.a., Drug resistance transporter EmrB/QacA subfamily from Pseudomonas syringae pv. syringae B728a

 Score =  244 bits (624), Expect = 4e-69
 Identities = 141/409 (34%), Positives = 222/409 (54%), Gaps = 1/409 (0%)

Query: 13  IFFTVFLPMFLAAVDQTLLATATPAIVRDLGNLQLSSWIAIGYMLASAASVPVYGWLGDQ 72
           I F + + + L+A+DQT++A + PAI     ++ L +W+   YM++   +VP+YG LGD 
Sbjct: 14  ILFALMMAVLLSALDQTIVAVSMPAISAQFRDIDLLAWVISAYMVSLTVAVPIYGKLGDL 73

Query: 73  YGRKPMLMIALSIFALGSVICAFAMNMPWLVAGRIVQGLGSGGLMSLSQALIGELVPPRE 132
           YGR+ +++  L IF L S+ C  A +M  LV  R++QG+G+GG++S+SQA+I ++VPPRE
Sbjct: 74  YGRRKLMLFGLGIFTLASLFCGLAQSMEQLVLARVLQGIGAGGMVSVSQAIIADIVPPRE 133

Query: 133 RARFQGYFSSLFAVASIGGPVLGGVLVTYLSWQWLFWFNLPLVGIALYRLARFQFVQSSR 192
           R R+QGYFSS++AVAS+ GPVLGG++  YLSW+W+F  NLPL   AL    R        
Sbjct: 134 RGRYQGYFSSMYAVASVAGPVLGGLMTEYLSWRWVFLINLPLGAAALIVAYRTLVGLPVP 193

Query: 193 KSEASIDVAGLILFPSMMTLIIYWLSAGGHYFPWFSVTSISLVSAFVLTSLLFIAQQKRV 252
           + +  ID  G +L    +T ++  ++  G            L+   +LT  +F+  ++R 
Sbjct: 194 QRKPIIDYLGTVLMIIGLTALLLGITEIGQGHGLGDAEVQLLLGTALLTLAIFVWYERRT 253

Query: 253 TASFLPLRLLARREIHIPLLSTFIFAACLFALIFFLPIFLQLGLRVNAAQSGLLLIPLSC 312
               LP+ L   +   +   + F  +    +LI  +P+  Q      A  + L L+PL+ 
Sbjct: 254 AEPLLPMHLFTNKSAVLCWCTVFFTSFQAISLIVLMPLRYQTVTGGGADSAALHLLPLAI 313

Query: 313 GIIGGAYTTGKVIAKTGVPKFLPVFGMSLSSCAFAVLAMF-SLSAPVVSAIAALCGLGLG 371
           G+  GAY  G+  A TG  K L + G  L   A   +A     S  V+S    L G+  G
Sbjct: 314 GMPMGAYFAGRRTAHTGRYKPLILTGALLMPVAILGMAFTPPQSLIVMSLFMVLTGVATG 373

Query: 372 TVMPSTQVLVQTLAGKANLGRITAMASLSRSLGASVGTAFFGTLIYSLL 420
              P++ V  Q      ++G  T+  +L RSLG +VG A    L+ ++L
Sbjct: 374 MQFPTSLVGTQNSVQPRDMGVATSTTNLFRSLGGAVGVALMSALLLAML 422