Pairwise Alignments

Query, 477 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 529 a.a., MDR family MFS transporter from Rhodopseudomonas palustris CGA009

 Score =  268 bits (684), Expect = 4e-76
 Identities = 156/456 (34%), Positives = 249/456 (54%), Gaps = 12/456 (2%)

Query: 13  IFFTVFLPMFLAAVDQTLLATATPAIVRDLGNLQLSSWIAIGYMLASAASVPVYGWLGDQ 72
           I  ++ L MFLAA+DQT++ATA P I R  G+++  SW+   Y+L+S A  PV+G L D 
Sbjct: 57  ILLSLLLAMFLAALDQTIVATALPTIGRQFGDVENLSWVITAYLLSSTAVAPVFGSLADI 116

Query: 73  YGRKPMLMIALSIFALGSVICAFAMNMPWLVAGRIVQGLGSGGLMSLSQALIGELVPPRE 132
           YGR+ M++++LS+F  GSV+CA A ++  L+ GR +QGLG GG+M + Q +I ++V PRE
Sbjct: 117 YGRRVMIIVSLSLFVAGSVMCALAPSLLVLILGRALQGLGGGGIMPIVQTVISDVVSPRE 176

Query: 133 RARFQGYFSSLFAVASIGGPVLGGVLVTYLSWQWLFWFNLPL----VGIALYRLARFQFV 188
           R ++Q YFS ++  A IGGP+LGG    +L W  +FW NLPL    + + L ++A+    
Sbjct: 177 RGQYQAYFSGVWVSAGIGGPILGGFFAEHLHWSMIFWINLPLAIGALALLLPKMAKIPVY 236

Query: 189 QSSRKSEASIDVAGLILFPSMMTLIIYWLSAGGHYFPWFSVTSISLVSAFVLTSLLFIAQ 248
              RK    +D  G +L  +    ++  L+ GG+ F W S T ++L  A VL +  FI  
Sbjct: 237 HRRRK----VDWLGGVLLMAAAMAVMLVLTWGGNRFAWLSPTILALSGAAVLLAASFIWH 292

Query: 249 QKRVTASFLPLRLLARREIHIPLLSTFIFAACLFALIFFLPIFLQLGLRVNAAQSGLLLI 308
             R    FLPL+L++   +   +         + AL   +P++ +    + A+QSGL LI
Sbjct: 293 ALRAREPFLPLQLMSGTVVPWAMAGGAFTMGAMIALTVHMPLYYEAVYHLTASQSGLALI 352

Query: 309 PLSCGIIGGAYTTGKVIAKTGVPKFLPVFGMSLSSCAFAVLAMFS-LSAPVVSAIAALCG 367
           P++   + GA  TG+ +      K + +FG S ++   A +A+ + L   +   + +LC 
Sbjct: 353 PIAAISVFGAAFTGRAMVHVERYKRIAIFGTSFAALMAAAIAVLTPLPLWLFLTLLSLCS 412

Query: 368 LGLGTVMPSTQVLVQTLAGKANLGRITAMASLSRSLGASVGTAFFGTLIYSLLPG---LS 424
           LGLGTV P + V +Q    +  +G  T   +  R+L AS   A F  ++   L G   L 
Sbjct: 413 LGLGTVFPVSVVSIQNAVPRPQIGTATGAMNFFRALMASFTVAAFTAILLIALGGNVQLG 472

Query: 425 PNSGLQAIAALPQSEILHAFQIGFAVAALLALLGAL 460
                  + ++  +E++  F+  F  AAL+    AL
Sbjct: 473 GGEHRHLVGSVAAAEMVAGFRWVFGAAALMLAASAL 508