Pairwise Alignments

Query, 477 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 519 a.a., drug resistance transporter, EmrB/QacA subfamily (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  163 bits (412), Expect = 1e-44
 Identities = 120/413 (29%), Positives = 197/413 (47%), Gaps = 13/413 (3%)

Query: 13  IFFTVFLPMFLAAVDQTLLATATPAIVRDLG-NLQLSSWIAIGYMLASAASVPVYGWLGD 71
           I   V +P  +  +D ++   A   I   L    +  +W+   Y++A+A  +P+ GWL  
Sbjct: 13  ITLAVMVPTLIEILDTSVANVALKHIQGSLAAGEEEVTWVLTSYLVANAIVIPMSGWLAR 72

Query: 72  QYGRKPMLMIALSIFALGSVICAFAMNMPWLVAGRIVQGLGSGGLMSLSQALIGELVPPR 131
             GRK  LM+++++F   S++C  A ++  ++  RI QGLG GGL  +SQA++ E  PP+
Sbjct: 73  LMGRKRFLMLSIAVFTASSLLCGAATSLAQIILFRIFQGLGGGGLQPMSQAILMETFPPQ 132

Query: 132 ERARFQGYFSSLFAVASIGGPVLGGVLVTYLSWQWLFWFNLPLVGIALYRLARFQF---V 188
           +R    G F     +  I GP+LGG L    +W+W+F+ NLP+  +ALY    F F    
Sbjct: 133 QRGMAMGIFGVGVVLGPILGPLLGGYLTDNFTWRWIFYINLPVGLLALYLAGAFLFDPPY 192

Query: 189 QSSRKSEASIDVAGLILFPSMMTLIIYWLSAGGHYFPWFS---VTSISLVSAFVLTSLLF 245
              R+    +D  GL L  + +  +   L   G    WFS   +T +++VSA  L  L+F
Sbjct: 193 MERRQRGEVVDYLGLALLTTGIGALQIVLDK-GQQDDWFSSPFITVLAVVSAVSLVGLVF 251

Query: 246 IAQQKRVTASFLPLRLLARREIHIPLLSTFIFAACLFALIFFLPIFLQLGLRVNAAQSGL 305
              + R     L  R+L  R   I  +  F      F  I  LP+FLQ  +   A  +GL
Sbjct: 252 --WELRHPRPVLDFRILKNRSFAIGNVVMFFGFFAFFGSIVLLPLFLQGLMGYTAYLAGL 309

Query: 306 LLIPLSCGIIGGAYTTGKVIAKTGVPKFLPVFGMSLSSCAFAVLAMFSLSAPVVSAIAA- 364
           +L P     +      GK+  +    +++  FGM + + +  ++A F+L     +A  A 
Sbjct: 310 VLGPGGMLALVFMPVAGKLTERIDA-RWMLAFGMLVCAYSLHIMAGFNLYIDFGTAAFAR 368

Query: 365 -LCGLGLGTVMPSTQVLVQTLAGKANLGRITAMASLSRSLGASVGTAFFGTLI 416
            L G+ +     S  V+      +  +   + + +L R+LG S G AF  TL+
Sbjct: 369 VLQGIAMPFFFVSLSVVTFAYVPREAMNTASPLYNLLRNLGGSFGVAFVTTLL 421