Pairwise Alignments

Query, 477 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 498 a.a., EmrB/QacA family drug resistance transporter from Klebsiella michiganensis M5al

 Score =  260 bits (664), Expect = 9e-74
 Identities = 145/411 (35%), Positives = 229/411 (55%), Gaps = 5/411 (1%)

Query: 13  IFFTVFLPMFLAAVDQTLLATATPAIVRDLGNLQLSSWIAIGYMLASAASVPVYGWLGDQ 72
           +F  + L M L+A+DQT+++TA P IV +LG L   SW+   Y+L+S  +VP+YG  GD 
Sbjct: 17  LFSALLLVMLLSALDQTIVSTALPTIVGELGGLDKLSWVVTAYILSSTIAVPLYGKFGDL 76

Query: 73  YGRKPMLMIALSIFALGSVICAFAMNMPWLVAGRIVQGLGSGGLMSLSQALIGELVPPRE 132
           +GRK +L +A+ +F  GSV+C  A NM  LV  R +QGLG GGLM +S A + +++PP  
Sbjct: 77  FGRKVVLQVAIVLFLAGSVLCGLAQNMTQLVLMRGLQGLGGGGLMVISMAAVADVIPPAN 136

Query: 133 RARFQGYFSSLFAVASIGGPVLGGVLVTYLSWQWLFWFNLPLVGIALYRLARFQFVQSSR 192
           R R+QG F  +F +A++ GP++GG LV + SW+W+F+ NLPL   AL  +    F  S++
Sbjct: 137 RGRYQGLFGGVFGLATVIGPLIGGFLVQHASWRWIFYINLPLGLFALLVIGAV-FHSSNK 195

Query: 193 KSEASIDVAGLILFPSMMTLIIYWLSAGGHYFPWFSVTSISLVSAFVLTSLL-FIAQQKR 251
           +S+  ID  G I     +  II + S GG    W S   +  + AF L  ++ FI +++ 
Sbjct: 196 RSQHQIDWLGAIYLSMALLCIILFTSEGGSVRAW-SDPQLWCILAFGLVGIIGFIHEERL 254

Query: 252 VTASFLPLRLLARREIHIPLLSTFIFAACLFALIFFLPIFLQLGLRVNAAQSGLLLIPLS 311
            +   +PL L   R   +  L  F+    LF  + FLP++LQ+       ++GL LIPL 
Sbjct: 255 ASEPIIPLSLFRNRSFLLCSLIGFVIGMALFGSVTFLPLYLQVVKEATPTEAGLQLIPLM 314

Query: 312 CGIIGGAYTTGKVIAKTGVPKFLPVFGMSLSSCAFAVLAMFSLSAPV--VSAIAALCGLG 369
            G++  +  +G++I++TG  +  P+ G  L      +L   ++ + +  +     + G G
Sbjct: 315 GGLLLTSIISGRIISRTGKYRVFPIIGTLLGVVGMVLLTRITIHSAMWQLYLFTGVLGAG 374

Query: 370 LGTVMPSTQVLVQTLAGKANLGRITAMASLSRSLGASVGTAFFGTLIYSLL 420
           LG VM    + VQ        G  T+  +L RS+G S+G A FG +   +L
Sbjct: 375 LGLVMQVLVLAVQNAMPAQMYGVATSGVTLFRSIGGSIGVALFGAVFTHVL 425