Pairwise Alignments

Query, 477 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., multidrug transporter subunit MdtD from Klebsiella michiganensis M5al

 Score =  134 bits (336), Expect = 9e-36
 Identities = 113/445 (25%), Positives = 197/445 (44%), Gaps = 20/445 (4%)

Query: 22  FLAAVDQTLLATATPAIVRDLGNLQLSS-WIAIGYMLASAASVPVYGWLGDQYGRKPMLM 80
           F+ A+D T++ TA P++ + LG   L    + + Y+L  A  +P  GWL D+ G + +  
Sbjct: 20  FMQALDTTIVNTALPSMAKSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFF 79

Query: 81  IALSIFALGSVICAFAMNMPWLVAGRIVQGLGSGGLMSLSQALIGELVPPRERARFQGYF 140
            A+ +F  GS+ CA A  +  L+  R++QG+G   ++ + +  + ++VP  +      + 
Sbjct: 80  CAIVLFTAGSLFCAQAATLDGLILARVLQGVGGAMMVPVGRLTVMKIVPRSQYMAAMTFV 139

Query: 141 SSLFAVASIGGPVLGGVLVTYLSWQWLFWFNLPLVGIALYRLARFQFVQSSRKSEASIDV 200
           +    V  + GP LGG+LV Y SW W+F  N+P VGI +  +A    + +        D+
Sbjct: 140 TLPGQVGPLLGPALGGMLVEYASWHWIFLINIP-VGI-VGAIATLCLMPNYTLQTRRFDL 197

Query: 201 AGLILFPSMMTLIIYWLSAGGHYFPWFSVTSISLVSAFVLTSLLFIAQQKRVTASFLPLR 260
            G +L  + M  +   L  G        +    LV+  V + L ++   +    +   L+
Sbjct: 198 FGFVLLAAGMATLTLALD-GNKGLGISPLWLAGLVAVGVASILYYLRHARGNRNALFSLK 256

Query: 261 LLARREIHIPLLSTFIFAACLFALIFFLPIFLQLGLRVNAAQSGLLLIPLSCGIIGGAYT 320
           L   R   + L  +F        L F  P+FLQ+GL      +GL++IP+  G +G    
Sbjct: 257 LFNNRTFSLGLGGSFAGRIGSGMLPFMTPVFLQIGLGFTPFHAGLMMIPMVLGSMGMKRI 316

Query: 321 TGKVIAKTGVPKFL--PVFGMSLSSCAFAVLAM--FSLSAPVVSAIAALCGLGLGTVMPS 376
             +V+ + G  + L     G++L S  F  +A+  +    PVV  +  +      + M +
Sbjct: 317 VVQVVNRFGYRRVLVASTIGLALVSLLFMAVALAGWYWLLPVVLFMQGMINASRFSSMNT 376

Query: 377 TQV--LVQTLAGKANLGRITAMASLSRSLGASVGTAFFGTLIYSLLPGLSPNSGLQAIAA 434
             +  L   LA   N     ++ S+   L  S+G    G L+     G      + A A 
Sbjct: 377 LTLKDLPDDLASSGN-----SLLSMVMQLSMSIGVTVAGMLL-----GFYGQQHISADAP 426

Query: 435 LPQSEILHAFQIGFAVAALLALLGA 459
                 L+ +     V AL AL+ A
Sbjct: 427 TTHQVFLYTYLSMAVVIALPALIFA 451