Pairwise Alignments

Query, 477 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., Putative multidrug resistance protein MdtD from Enterobacter sp. TBS_079

 Score =  140 bits (353), Expect = 9e-38
 Identities = 110/405 (27%), Positives = 188/405 (46%), Gaps = 21/405 (5%)

Query: 22  FLAAVDQTLLATATPAIVRDLGNLQLSS-WIAIGYMLASAASVPVYGWLGDQYGRKPMLM 80
           F+ ++D T++ TA P++ + LG   L    + + Y+L  A  +P  GWL D+ G + +  
Sbjct: 20  FMQSLDTTIINTALPSMAKSLGESPLHMHMVIVSYVLTVAVMLPASGWLADKVGVRNIFF 79

Query: 81  IALSIFALGSVICAFAMNMPWLVAGRIVQGLGSGGLMSLSQALIGELVPPRERARFQGYF 140
            A+ +F  GS+ CA A  +  LV  R +QG+G   ++ + +  + ++VP  +      + 
Sbjct: 80  TAIVLFTTGSLFCAQANTLDQLVMARALQGIGGAMMVPVGRLTVMKIVPREQYMAAMTFV 139

Query: 141 SSLFAVASIGGPVLGGVLVTYLSWQWLFWFNLPLVGIALYRLARFQFVQSSRKSEASIDV 200
           +    V  + GP LGGVLV Y SW W+F  NLP VGI +  +A    + +        D 
Sbjct: 140 TLPGQVGPLLGPALGGVLVEYASWHWIFLINLP-VGI-IGAIATLMLMPNYTMQTRRFDF 197

Query: 201 AGLILFPSMMTLIIYWLSAGGHYFPWFSVTSISLVSAFVLTSLLFIAQQKRVTASFL-PL 259
            G IL  + M ++   L+  G      S  ++ L+ A  +T++L+     R   S L  L
Sbjct: 198 LGFILLAAGMAMLT--LALDGQKGLGISALTLGLLVALGITAILWYLWHARGNESALFTL 255

Query: 260 RLLARREIHIPLLSTFIFAACLFALIFFLPIFLQLGLRVNAAQSGLLLIPLSCGIIGGAY 319
            L      H+ L  +F        L F  P+FLQ+G+  +   +GL++IP+  G +G   
Sbjct: 256 DLFKNPTYHLGLFGSFAGRVGSGMLPFMTPVFLQIGMGFSPFHAGLMMIPMVLGSMGMKR 315

Query: 320 TTGKVIAKTGVPKFL--PVFGMSLSSCAFAVLAMFS--LSAPVV----SAIAALCGLGLG 371
              +V+ + G    L     G++L S  F  +A+     + P+V      I ++    + 
Sbjct: 316 IVVQVVNRFGYRHVLVAATLGLALVSLLFMAVALLGWYYALPLVLFCQGIINSVRFSSMN 375

Query: 372 TVMPSTQVLVQTLAGKANLGRITAMASLSRSLGASVGTAFFGTLI 416
           T+  + + L   LA   N     ++ S+   L  SVG    G L+
Sbjct: 376 TL--TLKALPDDLASSGN-----SLLSMIMQLSMSVGVTLAGLLL 413