Pairwise Alignments

Query, 429 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  104 bits (259), Expect = 6e-27
 Identities = 62/157 (39%), Positives = 83/157 (52%), Gaps = 13/157 (8%)

Query: 269 DNLTRLNNRHFLNKISTKFIEHPHSI-----AAMIDIDHFKKINDQYGHITGDRILQAVA 323
           D LTRL NR FL  +  K + +            ID+DHFK+IND YGH  GD++LQ V 
Sbjct: 296 DVLTRLLNRKFLPVVMAKEVLYARQSNNAFGVLAIDVDHFKRINDTYGHEAGDQVLQQVG 355

Query: 324 SCLRKNVRDGDTIIRFGGEEFLLLFQAHSNKEAWYMLDRLRQRVKDDH------SLYGTT 377
           + L  N R GD   R GGEEFLL+       +A    ++LR+R+  +H       +   T
Sbjct: 356 ALLASNTRGGDYAFRLGGEEFLLVLVDIDASKALAAAEKLRERIAREHFRLSSGDVLQVT 415

Query: 378 ISIGFTFIDG--SLPAAISRADTALYQAKEAGRNQVV 412
           +S+G    DG       + +AD ALYQAK  GRN+ V
Sbjct: 416 VSVGMAVHDGHPDYERLLQQADRALYQAKNGGRNRCV 452