Pairwise Alignments

Query, 429 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score = 95.9 bits (237), Expect = 1e-24
 Identities = 79/213 (37%), Positives = 106/213 (49%), Gaps = 20/213 (9%)

Query: 218 YQLISVFNDKVRLFNLIYWVMSASLTLLLTLTWFL---TRLNLQKVAAQRH-VYIDNLTR 273
           Y + S  +  VRL +    +++ S  L+L L   L    RL  Q +    H   ID LT 
Sbjct: 73  YVIASEPSRVVRLHSRELPLLTQSPQLMLNLIELLCDRVRLTDQLIINSEHNANIDMLTG 132

Query: 274 LNNRHFLNKISTK------FIEHPHSIAAMIDIDHFKKINDQYGHITGDRILQAVASCLR 327
           + NR +L  I  +      F   P  +  MID+D FK  ND++GHI GD  L  VA  L 
Sbjct: 133 VFNRRWLEHIFERESARCAFSGQPLCML-MIDVDEFKPYNDRHGHIAGDHALCQVARLLG 191

Query: 328 KNVRDGDTIIRFGGEEFLLLFQAHSNKEAWYMLDRLRQRVKDDH-------SLYGTTISI 380
             +R  D+++RFGGEEF+ L        A  + +RLRQRV  +        SL G TIS+
Sbjct: 192 TQLRPKDSLVRFGGEEFVTLLPELDLPAARLIAERLRQRVAQNDTIATPIGSLPGVTISV 251

Query: 381 GFTFI--DGSLPAAISRADTALYQAKEAGRNQV 411
           G   +    +L   I RAD ALY AK  GRN+V
Sbjct: 252 GLARMRPSDTLEDLIGRADKALYLAKAQGRNRV 284