Pairwise Alignments

Query, 429 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score = 99.0 bits (245), Expect = 2e-25
 Identities = 64/171 (37%), Positives = 85/171 (49%), Gaps = 13/171 (7%)

Query: 254 RLNLQKVAAQRHVYIDNLTRLNNR-HFLNKISTKFIEH----PHSIAAMIDIDHFKKIND 308
           +L       QR    D LT L NR H+   +   +  H      +   M DIDHFK IND
Sbjct: 143 QLQAANAELQRLSSTDRLTGLYNRGHWEEMLRLDYARHRRYDSQAALVMFDIDHFKAIND 202

Query: 309 QYGHITGDRILQAVASCLRKNVRDGDTIIRFGGEEFLLLFQAHSNKEAWYMLDRLRQRVK 368
            YGH  GD ++Q VA  +R+N+RD D   R+GGEEF++L      + A    +RLRQ V+
Sbjct: 203 SYGHQVGDSVIQQVADLIRENLRDSDVAGRYGGEEFVVLLPDTDKQGALIFAERLRQAVE 262

Query: 369 D---DHSLYGTTISIGFTFIDGSLPAA-----ISRADTALYQAKEAGRNQV 411
                H  Y    +I     D S+P       I  AD+ALY +K  GRN+V
Sbjct: 263 AREVRHEQYRIRFTISLGVADLSMPTTSHAQLIEWADSALYVSKACGRNRV 313