Pairwise Alignments

Query, 429 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., Putative diguanylate cyclase (GGDEF domain) with GAF sensor domain (NCBI) from Rhodospirillum rubrum S1H

 Score = 99.8 bits (247), Expect = 2e-25
 Identities = 77/212 (36%), Positives = 107/212 (50%), Gaps = 29/212 (13%)

Query: 233 LIYWVMSASLTLLLTLTWFLTRLN----------LQKVAAQRHVYIDNLTRLNNRHFLNK 282
           L++W +   +T    L  F  R+            Q++   R    D LT L NR     
Sbjct: 269 LLWWELIIDVTETRPLDGFPLRMTGIVLEVNDRKTQELELARTAATDPLTGLANRRSFEA 328

Query: 283 ISTKFIEHPHSIAAM--IDIDHFKKINDQYGHITGDRILQAVASCLRKNVRDGDTIIRFG 340
           ++T+ +E+      +  IDID FK IND +GH  GD +L+ +A   R  +RDGD I R G
Sbjct: 329 LATRLLENKPGSGTLLVIDIDLFKHINDCFGHAAGDEVLRHLAIVGRSVLRDGDLIGRLG 388

Query: 341 GEEFLLLFQAHSNKEAWYMLDRLRQRVKD--------DHS--LYGTTISIGFT----FID 386
           GEEF +L Q     EA+ + DRL Q V++        +HS  +   TISIG      F D
Sbjct: 389 GEEFAVLLQM-DGPEAYAVADRLCQAVREMAVTAPSWEHSSVVVKITISIGIAHPCPFED 447

Query: 387 G--SLPAAISRADTALYQAKEAGRNQVVADSE 416
              +L  A+ RAD ALY AK+ GRNQ+  D+E
Sbjct: 448 PKFALSEALRRADRALYGAKKRGRNQICHDTE 479