Pairwise Alignments

Query, 429 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 519 a.a., Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor and Response Regulator Receiver modulation (NCBI) from Rhodospirillum rubrum S1H

 Score = 94.7 bits (234), Expect = 6e-24
 Identities = 66/173 (38%), Positives = 91/173 (52%), Gaps = 10/173 (5%)

Query: 261 AAQRHVYIDNLTRLNNRHFLNKISTKFIEHPHS-----IAAMIDIDHFKKINDQYGHITG 315
           A QR    D LT L NR  L       +             MID+DHFK+IND  GH  G
Sbjct: 346 AWQRLALTDPLTGLGNRRLLFDRGILEVARARRGCWPLSGLMIDLDHFKRINDTQGHAAG 405

Query: 316 DRILQAVASCLRKNVRDGDTIIRFGGEEFLLLFQAHSNKEAWYMLDRLRQRVKDDHSLYG 375
           D IL+ +A  LR+++R+ D I R GGEEF +L    S   A  + +RLR   +    + G
Sbjct: 406 DAILRTLADTLRESLREIDVIARVGGEEFAILLPDTSLTAAHEVGERLRLSCQIPQPVGG 465

Query: 376 -TTISIGFTFI---DGSLPAAISRADTALYQAKEAGRNQV-VADSEKENDSAA 423
             TIS+G + +   D  L   +SRAD ALY+AK  GR++V +AD  ++N   +
Sbjct: 466 PVTISVGISTLHPEDRGLGDMLSRADDALYRAKRNGRDRVEIADDSEDNQDVS 518