Pairwise Alignments

Query, 429 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., Putative diguanylate cyclase (GGDEF domain) (NCBI) from Rhodospirillum rubrum S1H

 Score = 95.5 bits (236), Expect = 3e-24
 Identities = 67/170 (39%), Positives = 90/170 (52%), Gaps = 19/170 (11%)

Query: 261 AAQRHVYIDNLTRLNNRHFLNKISTKFIEHP-----HSIAAMIDIDHFKKINDQYGHITG 315
           A  R   ID LT L NR +L  ++++ +        H + AMID DHFK+IND++GH  G
Sbjct: 268 ALARSAQIDPLTGLPNRRYLFDVASRALAATLRVGGHPVVAMIDADHFKEINDRFGHDVG 327

Query: 316 DRILQAVASCLRKNV-RDGDTIIRFGGEEFLLLFQAHSNKEAWYMLDRLRQRVK------ 368
           D++L+A+A  +  +V R  D + RFGGEEF +     S ++A+   D LR  V       
Sbjct: 328 DQVLEALARVMDDHVQRKSDVLARFGGEEFCVFVSDMSPEQAFTFFDGLRAAVAQSPLSV 387

Query: 369 ---DDHSLYGTTISIGF-TFIDGSLPAAISRADTALYQAKEAGRNQVVAD 414
              DD SL   TISIG  T     L   I  AD  LY AK AGR+  V +
Sbjct: 388 PGLDDLSL---TISIGVSTCAAPDLRTMIHSADRLLYDAKAAGRDCTVVE 434