Pairwise Alignments

Query, 429 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score = 99.4 bits (246), Expect = 2e-25
 Identities = 64/174 (36%), Positives = 99/174 (56%), Gaps = 16/174 (9%)

Query: 254 RLNLQKVAAQRHVYIDNLTRLNNRHFLNKISTKFI------EHPHSIAAMIDIDHFKKIN 307
           +L  +    Q+    D LT L NR  L+    +++      + P S+  ++D+D+FK+IN
Sbjct: 183 QLGERNAKIQKLAETDKLTGLYNREKLDITLEEYVLQSRHRQTPFSLL-ILDVDYFKQIN 241

Query: 308 DQYGHITGDRILQAVASCLRKNVRDGDTIIRFGGEEFLLLFQAHSNKEAWYMLDRLRQRV 367
           D +GH+TGDR+L  +A  LR   R+GD + R+GGEEF++L           + ++LRQ +
Sbjct: 242 DAHGHLTGDRVLVQLADSLRSLCREGDFLARWGGEEFVILLPETQLSICVAVAEQLRQDI 301

Query: 368 K----DDHSLYGTTISIGFTFI--DGSLPAAISRADTALYQAKEAGRNQVVADS 415
                D  SL   TIS+G   +  D +    ++RAD ALYQAK  GRN+VVA++
Sbjct: 302 AAQKFDGQSL---TISLGAAQLREDDTTKTLVNRADNALYQAKHTGRNRVVAEA 352