Pairwise Alignments

Query, 429 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score =  107 bits (266), Expect = 7e-28
 Identities = 62/154 (40%), Positives = 94/154 (61%), Gaps = 13/154 (8%)

Query: 269 DNLTRLNNR-HFLNKISTKFIEHPH----SIAAMIDIDHFKKINDQYGHITGDRILQAVA 323
           D LT+L+NR H+   +  +F  H      +   M DIDHFK+IND YGHI GDR++Q V+
Sbjct: 159 DGLTQLHNRRHWQLCMQKEFDRHARYGEPTTLVMFDIDHFKRINDTYGHIAGDRVIQHVS 218

Query: 324 SCLRKNVRDGDTIIRFGGEEFLLLFQAHSNKEAWYMLDRLRQRV-----KDDHSLYGTTI 378
             LR+++RD D   R+GGEEF ++    + + A +  DRLR+++     + + ++   T+
Sbjct: 219 HILRQSLRDTDCAGRYGGEEFSVVLSNTNAEAALHFADRLREKIEASELRFESAILKVTV 278

Query: 379 SIGFTFIDGSLPAA---ISRADTALYQAKEAGRN 409
           SIG   ID  L  +   + +AD+ALYQAK+ GRN
Sbjct: 279 SIGICGIDEHLSNSAQWLGQADSALYQAKQKGRN 312