Pairwise Alignments

Query, 429 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., diguanylate cyclase with extracellular sensor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  109 bits (272), Expect = 2e-28
 Identities = 74/191 (38%), Positives = 108/191 (56%), Gaps = 15/191 (7%)

Query: 235 YWVMS--ASLTLLLT--LTWFLTRLNLQKVAAQRHVYIDNLTRLNNRHFLNKISTKFIEH 290
           YW+++  A    LL   + W+  RL       +R    D LT L NR  LN++  + +E 
Sbjct: 282 YWLVARVAGFFALLVGVVLWYNRRLKRMNAVLERLARTDPLTDLPNRSRLNELFRREVER 341

Query: 291 ------PHSIAAMIDIDHFKKINDQYGHITGDRILQAVASCLRKNVRDGDTIIRFGGEEF 344
                 P SI  ++DIDHFK++ND+ GH+ GDR LQ  A  +R +VR  DT+ R+GGEEF
Sbjct: 342 AQRYRRPFSIV-ILDIDHFKRVNDELGHLAGDRTLQVFAGVVRDSVRGTDTVGRWGGEEF 400

Query: 345 LLLFQAHSNKEAWYMLDRLRQRVKDDHSLYGT--TISIGF-TFIDG-SLPAAISRADTAL 400
           L+L    + +EA  + +RLR  ++      G   T+S G   F +G S+   + RADTAL
Sbjct: 401 LVLCPETTAEEAVQLAERLRGSLRATQFEGGRIHTLSAGVAAFREGDSVDTLLHRADTAL 460

Query: 401 YQAKEAGRNQV 411
           Y+AK  GR++V
Sbjct: 461 YRAKNGGRDRV 471