Pairwise Alignments

Query, 429 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 97.4 bits (241), Expect = 9e-25
 Identities = 58/159 (36%), Positives = 92/159 (57%), Gaps = 12/159 (7%)

Query: 268 IDNLTRLNNRHFLNKIST----KFIEHPHSI-AAMIDIDHFKKINDQYGHITGDRILQAV 322
           +D+LT+L NR  L +        +  H   +  A+ DIDHFK IND +GH TGD+ LQ +
Sbjct: 359 LDSLTQLPNRAALEERMELEYRNYQRHKSPLWIAVADIDHFKIINDSFGHSTGDKTLQVI 418

Query: 323 ASCLRKNVRDGDTIIRFGGEEFLLLFQAHSNKEAWYMLDRLRQRVKD-----DHSLYGTT 377
           A  L+ ++RD + + R+GGEEF+L+     + +   +L+R+R++VK+      +     T
Sbjct: 419 AMALKNSLRDTEFVARYGGEEFVLILPDIDDSDIAQLLNRVREKVKNIPFKFKNQRITVT 478

Query: 378 ISIGFTFIDGS--LPAAISRADTALYQAKEAGRNQVVAD 414
           +SIG   + G+  +     RAD ALY+AK   R++VV D
Sbjct: 479 VSIGAARVMGNELIHETFERADAALYKAKHESRDRVVID 517