Pairwise Alignments

Query, 429 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 827 a.a., GAF domain/sensory box/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 96.7 bits (239), Expect = 2e-24
 Identities = 68/170 (40%), Positives = 91/170 (53%), Gaps = 14/170 (8%)

Query: 254 RLNLQKVAAQRHVYIDNLTRLNNRHFL----NKISTKFIEHPHSIAA-MIDIDHFKKIND 308
           R NL+  A  R    D LT   NR       N+   + + H   +A  M+DIDHFK +ND
Sbjct: 637 RKNLE-AALLREATTDPLTGGRNRRQFFVDANREFARALRHDSGLAVLMLDIDHFKNVND 695

Query: 309 QYGHITGDRILQAVASCLRKNVRDGDTIIRFGGEEFLLLFQAHSNKEAWYMLDRLRQRVK 368
            YGH  GD +L+A A+C  + +R  D   R GGEEF  L  A S +EA    +RLR+RV+
Sbjct: 696 LYGHQAGDEVLRAFAACCVEALRAYDVFGRLGGEEFAALLPAASPEEAMETAERLRKRVE 755

Query: 369 DDHSLY-GT----TISIGFTFI---DGSLPAAISRADTALYQAKEAGRNQ 410
               +Y GT    T+S+G T +   D      + RAD ALY AK+ GRN+
Sbjct: 756 RRSVVYEGTALQCTVSVGVTSLAAADLGFDDMLRRADRALYAAKDHGRNR 805