Pairwise Alignments

Query, 284 a.a., EAL domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1484 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score = 99.8 bits (247), Expect = 3e-25
 Identities = 68/239 (28%), Positives = 121/239 (50%), Gaps = 11/239 (4%)

Query: 10   ELSDILRKQRITPLFQPIVH-LASERAIGYESLSRGPQQSPLHTAGSLF-EAAEQCQRLP 67
            EL   + +Q     FQP +  L  ++ +G E+L R       +    +F   AE C  + 
Sbjct: 1234 ELRKAMDRQEFELYFQPQIDILKDDKVVGMEALLRWHHPKEGYIRPDIFIRVAESCGLII 1293

Query: 68   ELEKICVHKAA---AAWSS-FGIDSQLFINLSPDMLLHSQQHQW--ELPQLMQRHRLSAN 121
            E+++  + +A    A W+  FG + +L +N+S    +H +Q  +  ++ Q ++   + A 
Sbjct: 1294 EIDRWVIKQACLQGAKWAEHFGDELKLSVNVSA---VHFRQPDFIQDVQQALKESGMPAK 1350

Query: 122  QVVFEISERTPALQLDELKNSVQHLQAQGFSIAIDDMGSGYSGLKLWSELQPDFVKIDRY 181
             +  EI+E     +L   K+ ++ L+  G  +AIDD G+GYS L          +KIDR 
Sbjct: 1351 MLGLEITEGVLMKELHVAKDHLKALREIGIEVAIDDFGTGYSSLAYLRSFDVSTLKIDRS 1410

Query: 182  FIHNIDSNPIKLKFVRSLVQLAEQLDCQLIAEGVETRSELLAIADLGIELVQGYLFGRP 240
            F+ +I +N        S+++LA  L  +++AEGVET+ +L  +   G  ++QGY F +P
Sbjct: 1411 FLIDIATNEADQAIASSIIELARNLKLKVVAEGVETQEQLEQVFSRGCYIIQGYYFAKP 1469