Pairwise Alignments

Query, 293 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., LysR family transcriptional regulator YnfL from Pseudomonas fluorescens FW300-N2E2

 Score =  161 bits (408), Expect = 1e-44
 Identities = 103/294 (35%), Positives = 157/294 (53%), Gaps = 3/294 (1%)

Query: 2   MEFRYMKYFAAVAEAKHFTRAAEQLGIAQPPLSQQIKKLEEELGVNLFKRLSRGVELTPA 61
           ME R+++YF AVAE  HF RAA  LGI+QPPLSQQI+ LE+E+G  LF+R +R VEL+ A
Sbjct: 1   MELRHLRYFIAVAEELHFGRAALALGISQPPLSQQIQALEQEIGARLFERTNRRVELSEA 60

Query: 62  GELFYQDATSILQQVERAKDRVRQRARGEHLELRLGFAASTASSSVVLEKVRQLHETIPD 121
           G LF ++A  +L QV++A D  R+   GE  EL++GF +S   +S + + +    +  P 
Sbjct: 61  GRLFLEEARRVLVQVDKAADVARRAQLGELGELKIGFTSSAPFNSTIPQAIFSFRQRFPA 120

Query: 122 LQLIAVEHPMPELARMIQEKQLDIAFMRLPCYASEALRRKILFDDPFVAVIPAVHTLAE- 180
           + L   E    ++A  + ++ +++  MR P    +ALR   L  +P VAV+ A H LA+ 
Sbjct: 121 VHLNLREMSSTQVADALVDEVIEVGIMR-PLPLPDALREIELSREPLVAVLSAKHPLAQG 179

Query: 181 -VEKIQLIQLNHENVLMFPREVGPALYDNIEAAFSAAGVNIARSYAAPQLRTAITMAQAG 239
             E + L  L  E  + FPR  G  LY  +      AG +   +  A +  T I +  AG
Sbjct: 180 NEEGLFLSALAQEPFVFFPRSYGSGLYAQLLNLARDAGFSPHFAQEAGEAMTIIGLVAAG 239

Query: 240 FGIAIVPLSLTDHLDHSVVVKTIQDMPFVSQVAIVSDAGHHHPLLNRCIACMGE 293
            G++++P S        VV + + D   VS V +V       P+    +  + E
Sbjct: 240 LGVSVLPASYQRMRIDGVVYRPLLDPAAVSAVWLVQRKDQRSPMAKGFVELLTE 293