Pairwise Alignments

Query, 293 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., Transcriptional regulator from Pseudomonas stutzeri RCH2

 Score =  166 bits (421), Expect = 5e-46
 Identities = 103/284 (36%), Positives = 152/284 (53%), Gaps = 3/284 (1%)

Query: 2   MEFRYMKYFAAVAEAKHFTRAAEQLGIAQPPLSQQIKKLEEELGVNLFKRLSRGVELTPA 61
           ME R+++YF AVAE  HF RAAEQL I+QPPLSQQI+ LE+ELGV LF R +R V LT A
Sbjct: 1   MELRHLRYFVAVAEELHFGRAAEQLRISQPPLSQQIQALEQELGVRLFDRTNRRVALTDA 60

Query: 62  GELFYQDATSILQQVERAKDRVRQRARGEHLELRLGFAASTASSSVVLEKVRQLHETIPD 121
           G LF ++    L QV+++ D  R+  +GE  EL++GF +S   +S++   +     T P 
Sbjct: 61  GRLFLEETRRTLAQVDKSVDVARRAEQGEIGELKVGFTSSAPFTSILPRAILAFRRTFPA 120

Query: 122 LQLIAVEHPMPELARMIQEKQLDIAFMRLPCYASEALRRKILFDDPFVAVIPAVHTLAEV 181
           + L   E    ++   +Q++ L +  +R P      L+   LF +P VA++ A H LA+ 
Sbjct: 121 VHLDLQEMTSKQVVDAVQDETLQVGMIR-PFALPAGLQTVELFSEPLVALMHAGHRLADA 179

Query: 182 --EKIQLIQLNHENVLMFPREVGPALYDNIEAAFSAAGVNIARSYAAPQLRTAITMAQAG 239
             E + L  L  E  + FPR  G  LYD + +    AG N   +  A +  T I +  AG
Sbjct: 180 GDEGLTLADLADEPFVFFPRSYGTGLYDQLLSLARRAGFNPRIAQEANEALTIIGLVAAG 239

Query: 240 FGIAIVPLSLTDHLDHSVVVKTIQDMPFVSQVAIVSDAGHHHPL 283
            G++++P S        V  +T+ D    + V +V       PL
Sbjct: 240 LGVSVLPASFQRIRIDGVRFRTLLDKDATTAVWLVKRRQEQSPL 283