Pairwise Alignments

Query, 293 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., LysR family transcriptional regulator from Rahnella sp. WP5

 Score =  133 bits (334), Expect = 6e-36
 Identities = 87/252 (34%), Positives = 132/252 (52%), Gaps = 9/252 (3%)

Query: 2   MEFRYMKYFAAVAEAKHFTRAAEQLGIAQPPLSQQIKKLEEELGVNLFKRLSRGVELTPA 61
           +E R+++YF AVAE  HF RAAE+L I+QPPLSQQI+ LE  LG  LF R +R V LT A
Sbjct: 4   IELRHLRYFIAVAEELHFGRAAERLHISQPPLSQQIQALETHLGAALFYRNNRSVRLTQA 63

Query: 62  GELFYQDATSILQQVERAKDRVRQRARGEHLELRLGFAASTASSSVVLEKVRQLHETIPD 121
           G+ F  +A  ILQ+V  A  +  +  RGE   L LG  +S      V   + +   T PD
Sbjct: 64  GQAFLPEARQILQRVGEASAQAARIHRGESGNLTLGLTSSAPFLRRVSRTLHRFRLTYPD 123

Query: 122 LQLIAVEHPMPELARMIQEKQLDIAFMR---LPCYASEALRRKILFDDPFVAVIPAVHTL 178
           + +   +    +    + E +LD+  MR   LP    E L   ++  +P +AV+   H L
Sbjct: 124 VNIRIEQLNSKQQIEPLLEGKLDLGIMRNGELP----EELEHHLVLSEPLIAVVHKDHPL 179

Query: 179 AEVEKIQLI--QLNHENVLMFPREVGPALYDNIEAAFSAAGVNIARSYAAPQLRTAITMA 236
             +++ +L    L  +  + F ++VG +LYD+I       G+    +    +  T I + 
Sbjct: 180 NALKEGELTFQHLADQPFVFFSKDVGTSLYDDILGQLKVQGITPYITQEVGEPLTIIGLV 239

Query: 237 QAGFGIAIVPLS 248
            AG G++I+P S
Sbjct: 240 AAGLGVSILPAS 251