Pairwise Alignments

Query, 293 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., LysR family transcriptional regulator from Rhodopseudomonas palustris CGA009

 Score =  120 bits (300), Expect = 5e-32
 Identities = 89/288 (30%), Positives = 145/288 (50%), Gaps = 5/288 (1%)

Query: 2   MEFRYMKYFAAVAEAKHFTRAAEQLGIAQPPLSQQIKKLEEELGVNLFKRLSRGVELTPA 61
           ME R+++YFAAVA   +FT AAE LG+AQPPLSQQI+ LE E+G  LF+R +R V LT A
Sbjct: 1   MEIRHLRYFAAVARHLNFTAAAESLGVAQPPLSQQIRDLEAEIGTPLFERTTRRVALTRA 60

Query: 62  GELFYQDATSILQQVERAKDRVRQRARGEHLELRLGFAASTASSSVVLEKVRQLHETIPD 121
           GE F + A +IL++ + A  R R    G    L +G   S  +  +    ++Q     P+
Sbjct: 61  GEDFLKQALAILERADNAVQRARSIGAGTAGILNVGLTGSVLTGPLG-RAIQQFALNYPN 119

Query: 122 LQLIAVEHPMPELARMIQEKQLDIAFMRLPCYASEALRRKILFDDPFVAVIPAVHTLAEV 181
           + L   E         ++  Q D++F+R P   +E +  ++ + +    V+P  H L+  
Sbjct: 120 VDLRIHEMSPDRQVAALKSGQTDVSFLRCPPQDAE-IASELAWRESVRLVLPKGHALS-A 177

Query: 182 EKIQLIQLNHENVLMFPREVGPALYDNIEAAFSAAGVNIARSYAAPQLRTAITMAQAGFG 241
            K+ L  L  E+  +F R         +      AG     ++ A +  +  ++  AG G
Sbjct: 178 RKVTLADLRDES-FVFLRLEDSLFAKYLWQCCFEAGYAPRVTHQAIESTSLTSLVAAGLG 236

Query: 242 IAIVPLSLTDHLDHSVVVKTIQDMPFVSQVAIVSDAGHHHPLLNRCIA 289
           +AI+P  ++      VV + I   P  + V  ++ A  ++PL ++ IA
Sbjct: 237 VAIIPEFVSKLAHPDVVYRPIAGPPISADVHALTTAA-NNPLASQFIA 283