Pairwise Alignments

Query, 188 a.a., ankyrin repeat domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 183 a.a., FOG: Ankyrin repeat from Pseudomonas fluorescens FW300-N2E2

 Score =  116 bits (290), Expect = 3e-31
 Identities = 62/149 (41%), Positives = 94/149 (63%), Gaps = 3/149 (2%)

Query: 23  LLVLSPFRLSVAASEPSDTARSDTSQEYQSLISLFFAAARTGNDEVVNEFLSAGFPINQR 82
           L + + + LSV A +P  T  +   ++ Q+    +F AAR G+  ++  F+ AG+ +N +
Sbjct: 7   LSMFATWSLSVLADQPIPTEPAAVQEQLQNY---YFDAARRGDVPMLETFIEAGYSLNTQ 63

Query: 83  NAESYTALMVAAYQGNAQTVELLLRFGANACLQDKRGNTALMGALLKREIQIARALYQAE 142
           + + YTAL++AAY G+   VE LL  GA+AC QDKRGNTALMGA+ K E++IAR L   +
Sbjct: 64  DEKGYTALILAAYHGHGPAVERLLAAGADACAQDKRGNTALMGAIFKGEVRIARRLLSTD 123

Query: 143 CADNLRNKAGLSVQEFAELYGQSETLKAL 171
           C+ + RN AG +   +A L+ + E L AL
Sbjct: 124 CSPDQRNGAGQTAAMYAGLFKRDELLDAL 152



 Score = 30.8 bits (68), Expect = 1e-05
 Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 2/111 (1%)

Query: 24  LVLSPFRLSVAASEPSDTARSDTSQEYQSLISLFFAAARTGNDEVVNEFLSAGFPINQRN 83
           L+L+ +     A E    A +D   + +   +    A   G   +    LS     +QRN
Sbjct: 71  LILAAYHGHGPAVERLLAAGADACAQDKRGNTALMGAIFKGEVRIARRLLSTDCSPDQRN 130

Query: 84  AESYTALMVAAYQGNAQTVELLLRFGANACLQDKRGNTALMGALLKREIQI 134
               TA M A      + ++ L   GA+   QD  GNT +   L K EI++
Sbjct: 131 GAGQTAAMYAGLFKRDELLDALKAKGADLQAQDPLGNTPV--GLAKGEIRM 179