Pairwise Alignments

Query, 516 a.a., NADH-quinone oxidoreductase subunit L from Vibrio cholerae E7946 ATCC 55056

Subject, 617 a.a., NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) from Pseudomonas fluorescens FW300-N2E2

 Score =  167 bits (423), Expect = 1e-45
 Identities = 97/275 (35%), Positives = 157/275 (57%), Gaps = 6/275 (2%)

Query: 61  VDGLGIVMAILVSLLGWVITRFAHRYLQGEAQQARFVTATLFTLSCVALLVTSQHLLVIV 120
           +DGL I M  +V  +G++I  FA  Y++GEA  +RF   T   ++ +  LV   +LL + 
Sbjct: 83  LDGLSITMLGVVVGVGFLIHLFASWYMRGEAGYSRFFAYTNLFIASMLFLVLGDNLLFLY 142

Query: 121 LAWSGTSVGLHRLLTFYPERKAARVVAHKKFLVSRFAEICLLLALGLIYLDVGSLSLQEI 180
             W G  +  + L+ FY   +     A K F+V+R  ++ + + L +++  +G+L++QE+
Sbjct: 143 FGWEGVGLCSYLLIGFYYSNRNNGNAALKAFIVTRIGDVFMAIGLFILFQQLGTLNIQEL 202

Query: 181 HFALNAQDSLPLS---LTGAALLLAFAAILKTAQLPLHGWLIQVMEAPTPVSALLHAG-V 236
              + A +   +    +  A L+L   A+ K+AQLPL  WL   M  PTPVSAL+HA  +
Sbjct: 203 --LVKAPEHFKVGDFWIVLATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATM 260

Query: 237 VNMGGFVLLRVAELIGLVPSAQWLLVIVGSLTAVLAGMVMLTRISIKVRLAWSTCAQMGF 296
           V  G +++ R   L  L P    L+ IVG +T VLAG   L +  IK  LA+ST +Q+G+
Sbjct: 261 VTAGVYLIARTHGLFALAPDILHLVGIVGGVTLVLAGFAALVQTDIKRILAYSTMSQIGY 320

Query: 297 MLMEIGLGLYELALLHLVAHSLYKAYAFLSSGEAV 331
           M + +G+G +E A+ HL+ H+ +KA  FL+SG  +
Sbjct: 321 MFLALGVGAWEGAIFHLMTHAFFKALLFLASGAVI 355