Pairwise Alignments

Query, 516 a.a., NADH-quinone oxidoreductase subunit L from Vibrio cholerae E7946 ATCC 55056

Subject, 958 a.a., Na(+) H(+) antiporter subunit A / Na(+) H(+) antiporter subunit B from Pseudomonas fluorescens FW300-N1B4

 Score =  111 bits (278), Expect = 1e-28
 Identities = 91/320 (28%), Positives = 153/320 (47%), Gaps = 34/320 (10%)

Query: 37  LAGFIAMLGNT------------------LFAIGQASINLV-PVDGLGIVMAILVSLLGW 77
           LAG +A++G                     F +    +N V  +DG   + ++LV  +G 
Sbjct: 13  LAGLVALIGTVQVALLYPQIADGGVIREEFFWLPSLGLNFVLRMDGFAWLFSMLVLGIGT 72

Query: 78  VITRFAHRYLQGEAQQARFVTATLFTLSCVALLVTSQHLLVIVLAWSGTSVGLHRLLTFY 137
           +++ +A  Y+  +    RF    L  +  +  LV S +L+ IV  W  TS+    L+ ++
Sbjct: 73  LVSLYARYYMSPDDPVPRFFAFFLAFMGAMLGLVISGNLIQIVFFWELTSLFSFLLIGYW 132

Query: 138 PERKAARVVAHKKFLVSRFAEICLLLALGLIYLDVGSLSLQEIHFA---LNAQDSLPLSL 194
             R  AR  A+   +V+    +CLL  + L+   VGS  L ++  A   + A    P+ L
Sbjct: 133 HHRADARRGAYMALMVTGAGGLCLLAGVMLLGHVVGSYDLDKVLAAGELIRAHALYPILL 192

Query: 195 TGAALLLAFAAILKTAQLPLHGWLIQVMEAPTPVSALLH-AGVVNMGGFVLLRVAELIGL 253
                L+   A+ K+AQ P H WL   M APTPVSA LH A +V  G F+L R+     L
Sbjct: 193 P----LILIGALSKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWP--SL 246

Query: 254 VPSAQWLLVI--VGSLTAVLAGMVMLTRISIKVRLAWSTCAQMGFMLMEIGLG---LYEL 308
             S +W  ++   G+ T +L     + +  +K  LA+ST + +G + + +GL        
Sbjct: 247 SGSEEWFYIVGGAGACTLLLGAYCAMFQNDLKGLLAYSTISHLGLITLLLGLNSPLAAVA 306

Query: 309 ALLHLVAHSLYKAYAFLSSG 328
           A+ H++ H+ +KA  F+++G
Sbjct: 307 AVFHILNHATFKASLFMAAG 326