Pairwise Alignments

Query, 516 a.a., NADH-quinone oxidoreductase subunit L from Vibrio cholerae E7946 ATCC 55056

Subject, 617 a.a., NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) from Pseudomonas fluorescens FW300-N1B4

 Score =  167 bits (423), Expect = 1e-45
 Identities = 126/428 (29%), Positives = 210/428 (49%), Gaps = 49/428 (11%)

Query: 61  VDGLGIVMAILVSLLGWVITRFAHRYLQGEAQQARFVTATLFTLSCVALLVTSQHLLVIV 120
           +DGL + M  +V  +G++I  FA  Y++GEA  +RF   T   ++ +  LV + +LL + 
Sbjct: 83  LDGLSLTMLGVVVGVGFLIHLFASWYMRGEAGYSRFFAYTNLFIASMLFLVLADNLLFVY 142

Query: 121 LAWSGTSVGLHRLLTFYPERKAARVVAHKKFLVSRFAEICLLLALGLIYLDVGSLSLQEI 180
             W G  +  + L+ FY   +     A K F+V+R  ++ + + L +++  +G+L++QE+
Sbjct: 143 FGWEGVGLCSYLLIGFYYSNRNNGNAALKAFIVTRVGDVFMAIGLFILFQQLGTLNIQEL 202

Query: 181 HFALNAQDSLPLS---LTGAALLLAFAAILKTAQLPLHGWLIQVMEAPTPVSALLHAG-V 236
              + A +        +  A L+L   A+ K+AQLPL  WL   M  PTPVSAL+HA  +
Sbjct: 203 --LVKAPEHFKAGDFWIVLATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATM 260

Query: 237 VNMGGFVLLRVAELIGLVPSAQWLLVIVGSLTAVLAGMVMLTRISIKVRLAWSTCAQMGF 296
           V  G +++ R   L  L P    L+ +VG +T VLAG   L +  IK  LA+ST +Q+G+
Sbjct: 261 VTAGVYLIARTHGLFALAPDILHLVGVVGGVTLVLAGFAALVQTDIKRILAYSTMSQIGY 320

Query: 297 MLMEIGLGLYELALLHLVAHSLYKAYAFLSSGEAVERARLHDFQAPQSVNGKAVGALLAV 356
           M + +G+G +E A+ HL+ H+ +KA  FL+SG  +     H  Q    + G         
Sbjct: 321 MFLALGVGAWEGAIFHLMTHAFFKALLFLASGSVI--VACHHEQNIFKMGG--------- 369

Query: 357 GLSAALILILHHLWQSLT---SNLHLPNAVVAILAL---GF---APLLWQSGRFTPSGLS 407
                       LW+ L    ++  +  A +A L L   GF     +LW++      GL 
Sbjct: 370 ------------LWKKLPLAYASFIVGGAALAALPLVTAGFYSKDEILWEAFASGNQGLL 417

Query: 408 LGVLRVALLTQLYFVWHLLFAGLAPELRPAS----------PLALSFVMFCFITLYLMQV 457
              L  A +T LY  + L+F     E +  +          PL++  V+  F+   ++  
Sbjct: 418 YAGLVGAFMTSLY-TFRLIFIAFHGEAKTEAHAGHGIAHWLPLSVLIVLSTFVGAMIVPP 476

Query: 458 LLCLYPKS 465
           L  + P+S
Sbjct: 477 LHGVLPQS 484