Pairwise Alignments

Query, 516 a.a., NADH-quinone oxidoreductase subunit L from Vibrio cholerae E7946 ATCC 55056

Subject, 490 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

 Score = 99.8 bits (247), Expect = 2e-25
 Identities = 108/390 (27%), Positives = 176/390 (45%), Gaps = 40/390 (10%)

Query: 4   LSPQWLLVSLYLGGLVLSLWL--PQQQWRIAKFATLAGF--IAMLGNTLFAIGQASINLV 59
           LS  W+L +     LV++L    P+    I   A L  F  +A L  T+ A G+ ++ ++
Sbjct: 7   LSLAWILATPLAATLVIALNAKRPRLGEAIGVIAALLTFAQVAALTPTVLAGGRPTLVML 66

Query: 60  PV----------DGLGIVMAILVSLLGWVITRFAHRYLQG--EAQQARFVTATLFTLSCV 107
            V          D LG++ A++ + L      ++  YL+   EA Q RF       ++C 
Sbjct: 67  SVMDTIPLVFTLDPLGLLFALVAAALWIPAGLYSIAYLRANHEAHQPRFHAYFALAIACT 126

Query: 108 ALLVTSQHLLVIVLAWSGTSVGLHRLLTFYPERKAARV--VAHKKFLVSRFAEICLLLAL 165
             +  + +L  + L +   ++  + L+T     +A R   +     LV       LL+A+
Sbjct: 127 LGIALAGNLFTLFLFYEALTLSTYPLITHQGTAQAVRAGRIYMGMLLVPSIG--LLLVAI 184

Query: 166 GLIYLDVGSLSLQEIHFALNAQDSLPLSLTGAALLLAFAAILKTAQLPLHGWLIQVMEAP 225
            L +   G +  Q         D     L G  L L      K A +P H WL   M AP
Sbjct: 185 ILTHSLAGRMDFQPGGILAGRIDG---PLVGLLLALFVFGTAKAALMPFHRWLPAAMVAP 241

Query: 226 TPVSALLHA-GVVNMGGFVLLRVAEL---IGLVPSAQWL--LVIVGSLTAVLAGMVMLTR 279
           TPVSALLHA  VV  G F + +V      I L+ ++ W   L  V  ++ +LA ++ L +
Sbjct: 242 TPVSALLHAVAVVKAGVFTIAKVVISIFGIDLLAASSWTGWLTWVAGISVILASLIALRQ 301

Query: 280 ISIKVRLAWSTCAQMGFMLMEIGL--GLYELAL-LHLVAHSLYKAYAFLSSG---EAVER 333
            ++K RLA+ST +Q+ +++M + L   L  LA  LH+V H+  K   F ++G    A  +
Sbjct: 302 DNLKRRLAYSTISQLAYVVMALSLFSPLGVLAAGLHIVVHAFGKITLFFAAGAIHTATHK 361

Query: 334 ARLHDFQA-----PQSVNGKAVGALLAVGL 358
             +  F       P ++   AV +L  +GL
Sbjct: 362 DSVSQFAGIGRAMPWTMGAFAVASLSMIGL 391