Pairwise Alignments

Query, 516 a.a., NADH-quinone oxidoreductase subunit L from Vibrio cholerae E7946 ATCC 55056

Subject, 643 a.a., NADH-plastoquinone oxidoreductase, chain 5 (NCBI) from Rhodospirillum rubrum S1H

 Score =  149 bits (376), Expect = 3e-40
 Identities = 91/281 (32%), Positives = 157/281 (55%), Gaps = 11/281 (3%)

Query: 61  VDGLGIVMAILVSLLGWVITRFAHRYLQGEAQQARFVT-ATLFTLSCVALLVTSQHLLVI 119
           +D L  VM ++V+ + +++  ++  Y+  +A   RF+   +LFT   + +LVT+ +L+ +
Sbjct: 79  IDTLSAVMLMVVTTISFMVHIYSVGYMHHDASVPRFMAYLSLFTFFML-MLVTADNLVQM 137

Query: 120 VLAWSGTSVGLHRLLTFYPERKAARVVAHKKFLVSRFAEICLLLALGLIYLDVGSLSLQE 179
              W G  +  + L+ F+ E+ +A   A K F+V+R  +    L +  ++   G++ L  
Sbjct: 138 FFGWEGVGLASYLLIGFWYEKPSANAAAIKAFVVNRVGDFGFTLGIFGVFFVFGTVGLDA 197

Query: 180 IHF--ALNAQDSLPL------SLTGAALLLAFAAILKTAQLPLHGWLIQVMEAPTPVSAL 231
           I    A +A D +        ++T   LLL   A+ K+AQL LH WL   ME PTPVSAL
Sbjct: 198 IFAGAAQHANDVVTFFGIEWHAMTILCLLLFIGAMGKSAQLGLHTWLPDAMEGPTPVSAL 257

Query: 232 LHAG-VVNMGGFVLLRVAELIGLVPSAQWLLVIVGSLTAVLAGMVMLTRISIKVRLAWST 290
           +HA  +V  G F++ R++ L  L  +A  ++ IVG+ TA+ A  V   +  IK  +A+ST
Sbjct: 258 IHAATMVTAGVFMVARMSPLFVLSDTAMTVVTIVGASTAIFAATVGCVQNDIKRVIAYST 317

Query: 291 CAQMGFMLMEIGLGLYELALLHLVAHSLYKAYAFLSSGEAV 331
           C+Q+G+M   +G+G +   + HL+ H+ +KA  FL +G  +
Sbjct: 318 CSQLGYMFFALGVGAFGAGIFHLMTHAFFKALLFLGAGSVI 358