Pairwise Alignments

Query, 516 a.a., NADH-quinone oxidoreductase subunit L from Vibrio cholerae E7946 ATCC 55056

Subject, 505 a.a., NADH dehydrogenase (quinone) (NCBI) from Rhodospirillum rubrum S1H

 Score =  115 bits (287), Expect = 5e-30
 Identities = 83/283 (29%), Positives = 144/283 (50%), Gaps = 22/283 (7%)

Query: 61  VDGLGIVMAILVSLLGWVITRFAHRYLQ-------GEAQQARFVTATLFTLSCVALLVTS 113
           +D L  +M ++++L G+++  ++  Y+         +A  AR+       ++ +  LV+S
Sbjct: 96  LDPLSCLMLVVITLCGFLVVLYSGGYMSLGNVEHPSDANLARYYFFVCLFITAMVGLVSS 155

Query: 114 QHLLVIVLAWSGTSVGLHRLLTFYPERKAARVVAHKKFLVSRFAEICLLLALGLIYLDVG 173
            +   + L W  T++    L++FY + +A +  A+K  L++  A + L  A+ LIY++ G
Sbjct: 156 PNYFQLFLFWELTTLCSWGLISFYGDAEALKS-AYKALLITHGAGLFLAAAVVLIYVETG 214

Query: 174 SLSLQEIHFALNAQDSLPLSLTGAALLLAFAAILKTAQLPLHGWLIQVMEAPTPVSALLH 233
           S +   I+       SL ++  G       AA+ K AQ P   WL   M APTP S+ LH
Sbjct: 215 SFAFDAINLLTPGLKSLVIAFMG------IAALAKAAQFPFFTWLPTAMAAPTPASSYLH 268

Query: 234 -AGVVNMGGFVLLRVAELIGLVPSAQWL-LVIVGSLTAVLAGMVMLTRISIKVRLAWSTC 291
            A +V  G ++L R+A  +   P    L L ++  +T  LA ++   +  +K  LA+ST 
Sbjct: 269 AAAMVKAGIYLLARLALSVDAFPPELGLALSVIAIVTMCLAVVLYFPQDDLKRLLAFSTI 328

Query: 292 AQMGFMLMEIGLG------LYELALLHLVAHSLYKAYAFLSSG 328
           A +G+M++ I +G        E  +LHLV HS  K+  FL+ G
Sbjct: 329 ANLGYMVLGIAMGAMGSRTALEGGMLHLVGHSFTKSLLFLAVG 371