Pairwise Alignments

Query, 516 a.a., NADH-quinone oxidoreductase subunit L from Vibrio cholerae E7946 ATCC 55056

Subject, 697 a.a., NADH-quinone oxidoreductase subunit L from Rhodopseudomonas palustris CGA009

 Score =  156 bits (394), Expect = 3e-42
 Identities = 112/377 (29%), Positives = 188/377 (49%), Gaps = 24/377 (6%)

Query: 61  VDGLGIVMAILVSLLGWVITRFAHRYLQGEAQQARFVT-ATLFTLSCVALLVTSQHLLVI 119
           VD L  VM ++V+ +  ++  ++  Y+  +  + RF    +LFT + + +LVT+ +LL +
Sbjct: 134 VDTLTAVMLVVVTTVSSLVHLYSIGYMHEDPHRPRFFGYLSLFTFAML-MLVTADNLLQL 192

Query: 120 VLAWSGTSVGLHRLLTFYPERKAARVVAHKKFLVSRFAEICLLLALGLIYLDVGSLSLQE 179
              W G  +  + L+ F+ ++ +A   A K F+V+R  +   LL +  I++ VGS     
Sbjct: 193 FFGWEGVGLASYLLIGFWYQKPSANAAAIKAFVVNRVGDFGFLLGIFTIFVLVGSTDFDT 252

Query: 180 IHFALNAQDSLPLS--------LTGAALLLAFAAILKTAQLPLHGWLIQVMEAPTPVSAL 231
           I  A        ++        LT A L+L   A+ K+AQ  LH WL   ME PTPVSAL
Sbjct: 253 IFSAAPGLTGKTINFFGWHADALTLACLMLFMGAMGKSAQFLLHTWLPDAMEGPTPVSAL 312

Query: 232 LHAG-VVNMGGFVLLRVAELIGLVPSAQWLLVIVGSLTAVLAGMVMLTRISIKVRLAWST 290
           +HA  +V  G F++ R++ L  L P+AQ +++  G+ TA  A  + L +  IK  +A+ST
Sbjct: 313 IHAATMVTAGVFMVARMSPLFELAPNAQAVVMFFGATTAFFAATIGLVQNDIKRIVAYST 372

Query: 291 CAQMGFMLMEIGLGLYELALLHLVAHSLYKAYAFLSSGEAVERARLHDFQAPQSVNGKAV 350
           C+Q+G+M + +G G Y + + HL  H+ +KA  FL +G  +    +H  Q  +++ G   
Sbjct: 373 CSQLGYMFVAMGAGAYSVGMFHLFTHAFFKALLFLGAGSVIH--AMHHEQDIRNMGGLKD 430

Query: 351 GALLAVGLSAALILILHHLWQSLTSNLHLPNAVVAILALGFAPLLWQSGRFTPSGLSLGV 410
                 G+   LI  L      LT+     +A++    +   PL +     T        
Sbjct: 431 RIPFTYGV--MLIGTLALTGFPLTAGYFSKDAIIEAAFVSKNPLAFYGFLMTV------- 481

Query: 411 LRVALLTQLYFVWHLLF 427
             VA L   ++ W L+F
Sbjct: 482 --VAALLTSFYSWRLVF 496