Pairwise Alignments

Query, 516 a.a., NADH-quinone oxidoreductase subunit L from Vibrio cholerae E7946 ATCC 55056

Subject, 516 a.a., putative NADH-ubiquinone oxidoreductase from Phaeobacter inhibens DSM 17395

 Score =  275 bits (702), Expect = 4e-78
 Identities = 184/486 (37%), Positives = 271/486 (55%), Gaps = 40/486 (8%)

Query: 30  RIAKFATLAGFIA--MLGNTLFAIGQASINLVPVDGLG---------IVMAILVSLLGWV 78
           R+A++A L  F    M    L   G  S  L+ + G+G         +VM  LVS +GW+
Sbjct: 34  RLAEYAGLGAFAVSVMSAVLLMTTGPGSSPLLGLFGVGLSVRLDVVSVVMLCLVSFIGWI 93

Query: 79  ITRFAHRYLQGEAQQARFVTATLFTLSCVALLVTSQHLLVIVLAWSGTSVGLHRLLTFYP 138
           + R++  Y+ GEA+Q  F      TL+ V LLV S +L+ +VLAW+ TS+ LH+LL FY 
Sbjct: 94  VLRYSATYMDGEARQGAFTGWMAATLAAVLLLVMSGNLVQLVLAWTATSLCLHQLLLFYR 153

Query: 139 ERKAARVVAHKKFLVSRFAEICLLLALGLIYLDVGSLSLQEIHFALNAQDSLPLSLTGAA 198
           +R  AR  A KK LV+R +E+ L +A  L+ +  G+  +  I  A  A D L ++   AA
Sbjct: 154 DRTTARRAARKKALVARASELSLAIAALLLIMSYGTSDIASI-LAAAAPDLLTIA---AA 209

Query: 199 LLLAFAAILKTAQLPLHGWLIQVMEAPTPVSALLHAGVVNMGGFVLLRVAELIGLVPSAQ 258
           +L+A AA+L +AQ P HGWL +VMEAPTPVSALLHAGV+N GGF+L+R A+++   P+  
Sbjct: 210 VLIALAAVLASAQFPTHGWLTEVMEAPTPVSALLHAGVINAGGFLLIRFADVMLAAPAVM 269

Query: 259 WLLVIVGSLTAVLAGMVMLTRISIKVRLAWSTCAQMGFMLMEIGLGLYELALLHLVAHSL 318
            +LV++G  TA+  G+VMLT+ ++K  LAWST AQM FM+M+ GL L+ LALLH+VAHSL
Sbjct: 270 AVLVMLGGFTALFGGLVMLTQPAVKTSLAWSTIAQMAFMIMQCGLALFPLALLHIVAHSL 329

Query: 319 YKAYAFLSSGEAVERARLHDFQAPQSV-NGKAVGALLAVGLSAALILILHHLW------- 370
           YKA+AFLS+GEAV          P +V +G+ V  + A G+   +  ++  ++       
Sbjct: 330 YKAHAFLSAGEAVANVAAIRRPGPVAVPSGRNV--MQAFGIGIVIYALVGAVFGFDGKSV 387

Query: 371 QSLTSNLHLPNAVVAILALGFAPLLWQSGRFTPSGLSLGVLRVALLTQL-YFVWHL---- 425
           Q++   + L   V  ILA G A          P  L+   +  A  T + YF+  L    
Sbjct: 388 QAIALGVILIFGVAYILAQGLADA-------APGALTRRTVIYAAATSVSYFLLQLAALK 440

Query: 426 LFAGLAPELRPASPLALSFVMFCFITLYLMQVLLCLYPKSRL---SLWLYPWVYHGFYLD 482
           L AG  P      PL  + ++   ++   + V    +P   +   +  L   + +G Y +
Sbjct: 441 LTAGTLPATPAPGPLEWALILLALVSFGAVAVAQATFPLWAMHPAAAGLRVHLSNGLYAN 500

Query: 483 ETFTRL 488
             F RL
Sbjct: 501 AIFDRL 506