Pairwise Alignments

Query, 516 a.a., NADH-quinone oxidoreductase subunit L from Vibrio cholerae E7946 ATCC 55056

Subject, 615 a.a., NADH dehydrogenase I, L subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  176 bits (447), Expect = 2e-48
 Identities = 129/376 (34%), Positives = 196/376 (52%), Gaps = 31/376 (8%)

Query: 61  VDGLGIVMAILVSLLGWVITRFAHRYLQGEAQQARFVTATLFTLSCVALLVTSQHLLVIV 120
           +DGL + M  +V+ +G+ I  FA  Y++GE   +RF T T   ++ +  LV +  LL + 
Sbjct: 83  LDGLSLTMLGVVTGVGFFIHLFASWYMRGEEGYSRFFTYTNLFIASMLFLVLADDLLFVY 142

Query: 121 LAWSGTSVGLHRLLTFYPERKAARVVAHKKFLVSRFAEICLLLALGLIYLDVGSLSLQEI 180
           L W G  +  + L+ FY + +     A K F+V+R  ++ L + L ++Y ++G+L++ E+
Sbjct: 143 LGWEGVGLCSYLLIGFYYKDRNNGAAALKAFIVTRVGDVFLAIGLFILYQELGTLNIHEL 202

Query: 181 HF---ALNAQDSLPLSLTGAALLLAFAAILKTAQLPLHGWLIQVMEAPTPVSALLHAG-V 236
                 L A+ S  LSL  A L+L   A+ K+AQLPL  WL   M  PTPVSAL+HA  +
Sbjct: 203 LVRAPTLFAEGSPALSL--ACLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATM 260

Query: 237 VNMGGFVLLRVAELIGLVPSAQWLLVIVGSLTAVLAGMVMLTRISIKVRLAWSTCAQMGF 296
           V  G +++ R   L  L P    L+ +VG++T VLAG   L +  IK  LA+ST +Q+G+
Sbjct: 261 VTAGVYLIARTHGLFLLAPEVLHLVGLVGAITLVLAGFAALVQTDIKRILAYSTMSQIGY 320

Query: 297 MLMEIGLGLYELALLHLVAHSLYKAYAFLSSGEAVERARLHDFQAPQSVNG-----KAVG 351
           M + +G+G +E A+ HL+ H+ +KA  FLS+G  +     H  Q    + G       V 
Sbjct: 321 MFLALGVGAWEGAIFHLMTHAFFKALLFLSAGAVI--VACHHEQNIFKMGGLRKSLPLVY 378

Query: 352 ALLAVGLSAALILILHHLWQSLTSNLHLPNAVVAILALGFAPLLWQSGRFTPSGLSLGVL 411
           A   VG SA   L L      +TS  +  +A+           LWQ      S L    L
Sbjct: 379 ACFLVGGSALAALPL------VTSGFYSKDAI-----------LWQVEASGQSALLWAGL 421

Query: 412 RVALLTQLYFVWHLLF 427
             A LT LY  + L+F
Sbjct: 422 AGAFLTSLY-TFRLIF 436