Pairwise Alignments

Query, 516 a.a., NADH-quinone oxidoreductase subunit L from Vibrio cholerae E7946 ATCC 55056

Subject, 648 a.a., Ech hydrogenase, subunit EchA, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 84.3 bits (207), Expect = 1e-20
 Identities = 73/286 (25%), Positives = 136/286 (47%), Gaps = 17/286 (5%)

Query: 61  VDGLGIVMAILVSLLGWVITRFAHRYLQG--------EAQQARFVTATLFTLSCVALLVT 112
           VD L + M +++S +G +I  +   Y++         + +Q RF    +  L  +  LV 
Sbjct: 122 VDSLSLTMVLIISFVGGLICVYGLGYMKEHEEHLHLPQTKQPRFFFFVVLFLGAMNGLVL 181

Query: 113 SQHLLVIVLAWSGTSVGLHRLLTFYPERKAARVVAHKKFLVSRFAEICLLLALGLIYLDV 172
           S +L  +   W  T++    L+  +     A+  A +   ++    +  + AL  +   +
Sbjct: 182 SNNLAWMYFFWEITTLCSFMLIG-HDGTDEAKTNATRALWMNMVGGVAFVFALLFLQKGM 240

Query: 173 GSLSLQEIHFALNAQDSLPLSLTGAALLLAFAAILKTAQLPLHGWLIQVMEAPTPVSALL 232
           G+LS+Q+I       +    ++     +L  A   K+AQLP   WL   M APTPVSALL
Sbjct: 241 GTLSVQDILARAVEPEMRTTAVLLPMAMLCLAGFTKSAQLPFQSWLCGAMVAPTPVSALL 300

Query: 233 HAG-VVNMGGFVLLRVAELIGLVPSA-QWLLVIVGSLTAVLAGMVMLTRISIKVRLAWST 290
           H+  +V  G +++LR+A   G   +A    + + G+ T ++   +   + + K  LA+ST
Sbjct: 301 HSSTMVKAGVYLILRMAP--GYAGTALSTGVALFGAFTFIVTSALAAGQSNGKKILAYST 358

Query: 291 CAQMGFMLMEIGLGL---YELALLHLVAHSLYKAYAFLSSGEAVER 333
            A +G ++   G+        A++ ++ H++ K   FL  G A+E+
Sbjct: 359 IANLGLIVACAGINTAASVAAAMMLIIFHAISKGLLFLCVG-AIEQ 403