Pairwise Alignments

Query, 516 a.a., NADH-quinone oxidoreductase subunit L from Vibrio cholerae E7946 ATCC 55056

Subject, 1253 a.a., hydrogenase, CooM subunit, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 90.5 bits (223), Expect = 3e-22
 Identities = 92/365 (25%), Positives = 158/365 (43%), Gaps = 41/365 (11%)

Query: 61   VDGLGIVMAILVSLLGWVITRFAHRYLQGEAQQARFVTATLFTLSCVALLVTSQHLLVIV 120
            +D L     + V+++G +   +A  Y++    Q RF T  LF +  +  +  S+ L    
Sbjct: 750  LDMLSYGFVLTVAVIGCLNMVYAVGYMEHSHTQWRFYTFFLFMVGGLMGVAASRDLYSFF 809

Query: 121  LAWSGTSVGLHRLLTFYPERKAARVVAHKKFLVSRFAEICLLLALGLIYLDVGSLSLQEI 180
              W   S      +  + E   A     K F  +      + L + L+    GS +   +
Sbjct: 810  TFWEIMSSWSLYCVIVHEEFPEALREGFKYFFFNVLGAAFMFLGVVLLTAGAGSPAFDAV 869

Query: 181  HFALNAQDSLPLSLTGAAL-LLAFAAILKTAQLPLH-GWLIQVMEAPTPVSALLHAGVVN 238
            H AL    S+P+ L+  A+ L+    ++K AQLP      +    APTPVS  + + ++ 
Sbjct: 870  HAAL---PSMPVGLSATAVGLMVLGLVMKAAQLPFRIDVQMHPATAPTPVSGYISSVLLK 926

Query: 239  M-------------GGFVLLRVAEL---IGLVPSAQWLLVIVGSLTAVLAGMVMLTRISI 282
                          GG VL++ A     IGL+    W    VG +T V+A ++ + +  +
Sbjct: 927  SALFGLAKLLLALGGGAVLVQAAGFTDGIGLMQVVAW----VGGITIVMAALLAVLQSDL 982

Query: 283  KVRLAWSTCAQMGFMLMEIGLGL---YELALLHLVAHSLYKAYAFLSSGEAVERARLHDF 339
            K+ L +ST +Q+G+M++   LG        LLHL  H L+K   FL +G  + +   H  
Sbjct: 983  KLVLIYSTVSQLGYMVLAFALGTPLGMAGGLLHLANHVLFKDLLFLVAGALILQTHKHSL 1042

Query: 340  --------QAPQSVNGKAVGALLAVGLS-----AALILILHHLWQSLTSNLHLPNAVVAI 386
                    + P ++   A+GAL  VG+       +  +I H L Q     L + + V ++
Sbjct: 1043 DQLGGIGRKMPVTLGVFAIGALSVVGVPPTNGFTSKWIIYHALMQQGEVMLAILSLVGSV 1102

Query: 387  LALGF 391
            L L +
Sbjct: 1103 LTLAY 1107



 Score = 59.3 bits (142), Expect = 8e-13
 Identities = 66/233 (28%), Positives = 100/233 (42%), Gaps = 26/233 (11%)

Query: 150 KFLVSRFAEICLLLALGLIYLDVGSLSLQEIHFALNAQDSLPLSLTGAALLLAFAAILKT 209
           K+ V   A    +L   L+  + GS     +  A+   D  P+ L  A LL      +K 
Sbjct: 361 KYFVMCAAGAMFMLPGLLMLTNGGSADFDAVTTAVRQLD--PMLLKAALLLTLAGFAVKA 418

Query: 210 AQLPLHGWLIQVME-APTPVSALLHA--------GVVNM-----GGFVLLRVAELIGLVP 255
             +P+HGWL      AP+ +S  L          G+V +     G  VLL+  E I  + 
Sbjct: 419 GFVPVHGWLPDAHPVAPSSISGPLSGLLTKTGIYGIVRVLFAICGMTVLLQTGEGIAGIS 478

Query: 256 SAQWLLVIVGSLTAVLAGMVMLTRISIKVRLAWSTCAQMGFMLMEIGLGLY---ELALLH 312
                +  +G LT     ++ L +  IK  LA+ST  Q+G +   IGLG +     AL H
Sbjct: 479 WMGAAVTTLGVLTMAYGEVMALRQDDIKRLLAYSTMGQIGEIATIIGLGTWLSTTGALAH 538

Query: 313 LVAHSLYKAYAFLSSGEAVERA--RLHDF-----QAPQSVNGKAVGALLAVGL 358
           ++ H++ K   FL +G  V RA  +L D        P +     VG L  +G+
Sbjct: 539 VLNHAIMKNLLFLCAGALVMRAGRKLEDLAGMGRMMPWTAGCMMVGVLSIMGM 591