Pairwise Alignments

Query, 303 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., Cys regulon transcriptional activator CysB from Acidovorax sp. GW101-3H11

 Score =  133 bits (335), Expect = 4e-36
 Identities = 88/287 (30%), Positives = 142/287 (49%), Gaps = 3/287 (1%)

Query: 18  NFHHLHYFWTVAKEGHLTRAAQQLNVSQSALSSQIRQLEGQLGHDLFVRQGRSLQLTEVG 77
           N+ HL YFW VAKEG + RAA++L+++   +S+Q+R+LE  LG  L   +GR+L LT+ G
Sbjct: 6   NYRHLFYFWVVAKEGGIARAAERLDMAVQTISAQVRELEKSLGVSLLRTEGRNLVLTDAG 65

Query: 78  HLVLEYAESIFNLSGELLSI-MESGELQRVQQLRIGSVATLSRNFQENFLRPVLGKSDVR 136
              L  A+ IF L GELL + +      +  +L +G    +++      L PVL +  +R
Sbjct: 66  VAALHEADHIFAL-GELLPVRVREAASGQTLRLNLGISDGIAKLAVHRLLTPVLDEPHLR 124

Query: 137 LILSSSTLEDLLGQLQMHKLDLILSNRPVPSDSTQPWRCKRIAQQSVCLVGPPS-DTLRR 195
           L+      + LLG+L +HKLD +L++R  P +       + +   ++    PP       
Sbjct: 125 LLCHEGEFQPLLGELALHKLDAVLADRAAPPNPALRTTSQLLGSSAIAWYAPPLWAEAAA 184

Query: 196 YQFPQDLPKVKTLVPGASSEIRLQFDLYCEQLGLAVTPYAEVDDMAMLRLLARDVEGVTV 255
             FP  L  V  L+P   + +R + D + E+  +      E +D A+L   A    GV  
Sbjct: 185 NNFPHSLAVVPVLLPTDHAAMRARIDHWLERERIRPRIAGEFEDSALLSTFAATGMGVMP 244

Query: 256 VPEVVVQDEIETGRLCNYGTLDAVTESFYAITTKRHFDMSIVNRLLD 302
            P  + +   +T  L   GT   V E F+ I + R     ++ RLL+
Sbjct: 245 APVSLGEHLAQTHGLVQVGTTPDVQEQFHLIYSARKVMHPLLTRLLE 291