Pairwise Alignments

Query, 303 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., regulatory protein, LysR:LysR, substrate-binding protein from Pseudomonas syringae pv. syringae B728a

 Score = 85.5 bits (210), Expect = 1e-21
 Identities = 78/281 (27%), Positives = 129/281 (45%), Gaps = 24/281 (8%)

Query: 21  HLHYFWTVAKEGHLTRAAQQLNVSQSALSSQIRQLEGQLGHDLFVRQGRSLQLTEVGHLV 80
           H+ Y   VA  G+ TRAA+ L+VSQ ALS QIRQLE  LG  LF R  RS+  T+ G + 
Sbjct: 17  HIRYLLAVADHGNFTRAAEALHVSQPALSQQIRQLESSLGVQLFDRTRRSVVPTDAGRVY 76

Query: 81  LEYA-ESIFNLSGELLSIMESGELQRVQQLRIGSVATLSRNFQENFLRPVLGK-----SD 134
           L++A   +  L     ++ +  +L R  QLR+G   T    F E  + P++ +       
Sbjct: 77  LDHARRCLLELDAGKRALNDVSDLSR-GQLRLGVTPT----FSEYLIAPLIDRFSALYPG 131

Query: 135 VRLILSSSTLEDLLGQLQMHKLDLIL---SNRPVPSDSTQPWRCKRIAQQSVCLV-GPPS 190
           V +IL+   LE +   L    LDL +    +  V  DS QP     +  + +CLV   P+
Sbjct: 132 VAIILTELPLEQITEALISDALDLAIGFAGSHAVEIDS-QP-----LFDEQLCLVMAKPA 185

Query: 191 DTLRRYQFPQDLPKVKTLVPGASSEIRLQFDLYCEQLGLAVTPYAEVDDMAMLRLLARDV 250
              +     +DL  ++  +       R   D +C+          E + +A+L  +    
Sbjct: 186 SEKQAALTLEDLQALRFALLAPGFATRQLLDAWCQMQNFKPIIGLEANSIAILLKVVAQG 245

Query: 251 EGVTVVPEVVVQDEIETGRLCNYGTLDAVTESFYAITTKRH 291
              T++P+ +V+ +     LC   T+ A+     A+  +++
Sbjct: 246 RMATILPDAIVRKQ---PGLCEVQTIPALPGRTVALLRRKN 283