Pairwise Alignments

Query, 303 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., transcriptional activator NhaR (RefSeq) from Shewanella amazonensis SB2B

 Score =  135 bits (341), Expect = 9e-37
 Identities = 95/290 (32%), Positives = 144/290 (49%), Gaps = 6/290 (2%)

Query: 14  MRHLNFHHLHYFWTVAKEGHLTRAAQQLNVSQSALSSQIRQLEGQLGHDLFVRQGRSLQL 73
           M+HLN++HL+YFW V  +G + +AA+ L ++   ++ QIR LE +LG  LF R GR L+ 
Sbjct: 1   MQHLNYNHLYYFWMVQSKGSVVKAAEALCLTPQTVTGQIRALEDRLGGALFKRVGRQLEP 60

Query: 74  TEVGHLVLEYAESIFNLSGELLSIMESGELQRVQQLRIGSVATLSRNFQENFLRPVL-GK 132
           T++G LV  YA+ +FNLS ELL I+   +        +G    LS+      L  VL   
Sbjct: 61  TDLGELVFRYADKMFNLSYELLDILNYRK-DAAMLFEVGIADALSKALSSRVLLSVLPTD 119

Query: 133 SDVRLILSSSTLEDLLGQLQMHKLDLILSNRPVPSDSTQPWRCKRIAQQSVCLVGPPSDT 192
             +RL    +T E L+ +L+ HKLD+ILS+    S        K++ +   C V   S  
Sbjct: 120 GSMRLACYEATHESLMARLREHKLDMILSDCAGESLKYPEILSKKLGE---CGVSFFSSK 176

Query: 193 LRRYQFPQDLPKVKTLVPGASSEIRLQFDLYCEQLGLAVTPYAEVDDMAMLRLLARDVEG 252
                FP  L + K L+PG  + +  Q   +  +  L V    E DD AM++      +G
Sbjct: 177 TYTKPFPACLEEDKLLIPGKRTSLGQQLHRWFAEKNLEVRILGEFDDAAMMKAFGFFGQG 236

Query: 253 VTVVPEVVVQDEIETGRLCNYGTLDAVTESFYAITTKRHFDMSIVNRLLD 302
           + V P +  QD +  G      T D V E ++ +  +R      V RLL+
Sbjct: 237 IFVAPSIYKQDILGHGMQVIGETRD-VREEYHVMFAERMIQHPAVQRLLE 285