Pairwise Alignments

Query, 303 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., transcriptional activator NhaR (RefSeq) from Shewanella sp. ANA-3

 Score =  131 bits (330), Expect = 2e-35
 Identities = 91/290 (31%), Positives = 146/290 (50%), Gaps = 6/290 (2%)

Query: 14  MRHLNFHHLHYFWTVAKEGHLTRAAQQLNVSQSALSSQIRQLEGQLGHDLFVRQGRSLQL 73
           M HLN++HL+YFW + K+G + +AA+ L ++   ++ QIR LE +L   LF R GR+L+ 
Sbjct: 1   MLHLNYNHLYYFWMIKKKGSVAKAAEALCLTPQTITGQIRALEDRLNGSLFKRVGRNLEA 60

Query: 74  TEVGHLVLEYAESIFNLSGELLSIMESGELQRVQQLRIGSVATLSRNFQENFLRPVL-GK 132
           TE+G LV  YA+ +F+LS E+L ++   +   +    +G    LS+      L  V+   
Sbjct: 61  TELGELVFRYADKMFSLSYEMLDLLNYQKDDAI-LFEVGIADALSKALASRVLLSVVPND 119

Query: 133 SDVRLILSSSTLEDLLGQLQMHKLDLILSNRPVPSDSTQPWRCKRIAQQSVCLVGPPSDT 192
             + L    +T E L+ +L+ HKLD+ILS+    S        K++ +   C V   S  
Sbjct: 120 GSMHLACYEATHESLMTRLREHKLDMILSDCAGESLKYPEILSKKLGE---CGVSFFSAE 176

Query: 193 LRRYQFPQDLPKVKTLVPGASSEIRLQFDLYCEQLGLAVTPYAEVDDMAMLRLLARDVEG 252
                FP  L + + L+PG  + +  Q   + ++  L V+   E DD AM++       G
Sbjct: 177 TYSADFPACLEQGQLLIPGRRTSLGQQLYRWFDEQNLKVSILGEFDDAAMMKAFGYLKRG 236

Query: 253 VTVVPEVVVQDEIETGRLCNYGTLDAVTESFYAITTKRHFDMSIVNRLLD 302
           + V P V  Q+ I  G      TLD V E ++ +  +R      V RLL+
Sbjct: 237 IFVTPSVYPQEVISHGMHLLGETLD-VKEEYHVMFAERMIQHPAVKRLLE 285