Pairwise Alignments
Query, 556 a.a., lipid A modification system glycine--protein ligase AlmE from Vibrio cholerae E7946 ATCC 55056
Subject, 4328 a.a., Pyoverdine chromophore precursor synthetase PvdL from Pseudomonas fluorescens FW300-N2E2
Score = 169 bits (428), Expect = 2e-45
Identities = 164/539 (30%), Positives = 254/539 (47%), Gaps = 53/539 (9%)
Query: 38 AAIQANRHAPALWVKQKTYTYQEMTDMALSLSDYWHLQGV---QRVAILSVRDLAAYSAI 94
A + A+ H PA+ +Y+Y E+ + L GV Q VA+L+ RD I
Sbjct: 3722 ARVAAHPHRPAVSCLDTSYSYAELNARSNRLGHALIAAGVGLDQPVALLAERDAELLGMI 3781
Query: 95 WASYLGGMTYIPLNARATTEQIQETLIATQCDSIMVDAQQLSRLSSLLETCIDRLHIYAL 154
S+ G Y+PL+ ++++ + +LSR L+ T + AL
Sbjct: 3782 VGSFKAGAGYLPLDPGLPSQRLGRII-------------ELSRTPLLVCTQACQAQAQAL 3828
Query: 155 PDVDVEPLRQQYPQHTFHTVQITEQDVELLVVKYHLDNEHEYAYIMQTSGSTGKPKRIAV 214
D R + + VQ + +E V DN AY++ TSGSTG PK + V
Sbjct: 3829 LDEFACSGRPKLL--VWEAVQASALSLENPGVYSGPDN---LAYVIYTSGSTGLPKGVMV 3883
Query: 215 SYSN-LHCYISQIDKLFPLNAQDRVGQYSDLTFDLSVHDIFYSLISGACLYVVPELAKLS 273
L+ +S++ L L+ D + Q + +FD+SV + + GA + +VP
Sbjct: 3884 EQRGMLNNQLSKVPYL-ALSEVDVIAQTASQSFDISVWQFLAAPLFGARVDIVPNAIAHD 3942
Query: 274 PAEFIHHHQ---LTVWLSVPTVIELALQRQTLTPHSLPSLRLSFFCGQALLHDLAEQWQ- 329
P + H Q +TV SVP++I+ L ++ + L LR G+A+ +LA QW
Sbjct: 3943 PQGLLEHVQQQGITVLESVPSLIQGMLAQERI---GLDGLRWMLPTGEAMPPELAHQWLL 3999
Query: 330 QATQQPVINLYGPTECTIAVTYHRF-VAHSGMASVPIGRAFEEECLAIINEQGELMRFES 388
+ ++N YGP EC+ V + R +A + +PIG + L +++ +L+
Sbjct: 4000 RYPDIGLVNAYGPAECSDDVAFFRVDLASTRGTYLPIGTPTDNNRLYLLDGALDLV---- 4055
Query: 389 APEGYRGELLLSGKQLVKGYLNDPLNTQSAF----FQHEGRLWYRSGDIVTK-SNGVLIH 443
P G GEL ++G + +GY++DPL T F F G YR+GD+ + S+GVL +
Sbjct: 4056 -PLGAVGELCVAGIGVGRGYVSDPLRTAPVFVPNPFGAPGERLYRTGDLARRRSDGVLEY 4114
Query: 444 LGRRDHQVKIAGQRVELEEIETVVRRVTQAHSVAIVPWPLSESGYASGTVAF-VDTHTQW 502
+GR DHQVKI G R+EL EIE + + A+ + E V + V T +
Sbjct: 4115 VGRIDHQVKIRGYRIELGEIEARLHEQPEVRDGAV---GVQEGVNGKHLVGYLVATDSAL 4171
Query: 503 QPDLWLSQCKQQLNPT----FVPKRWYAIEQLPRNANGKTDIKALQQ----QLASQTYE 553
+P L + KQ+L VP W +E+LP NANGK D KAL QL SQ Y+
Sbjct: 4172 KPAERLERIKQRLRAELPEYMVPLHWLWLERLPLNANGKLDRKALPALEIGQLQSQDYQ 4230
Score = 140 bits (353), Expect = 1e-36
Identities = 144/518 (27%), Positives = 220/518 (42%), Gaps = 50/518 (9%)
Query: 46 APALWVKQKTYTYQEMTDMALSLSDYWHLQGVQ---RVAILSVRDLAAYSAIWASYLGGM 102
APAL +T TY ++ A L+ +GV RV + R L + A G
Sbjct: 2201 APALTFAGQTLTYAQLDSSANRLAWMLRERGVGPQVRVGLALERSLEMVIGLLAILKAGG 2260
Query: 103 TYIPLNARATTEQIQETLIATQCDSIMVDAQQLSRLSSLLETCIDRLHIYALPDVDVEPL 162
Y+PL+ +++ + + ++ D L L +L D + + L D P
Sbjct: 2261 AYVPLDPEYPLDRLHYMIEDSGISLLLSDRAMLQALGALP----DGVGCWCLEDDS--PA 2314
Query: 163 RQQYPQHTFHTVQITEQDVELLVVKYHLDNEHEYAYIMQTSGSTGKPKRIAVSYSNLHCY 222
QYP H + + + AY++ TSGSTGKPK + VS+ + +
Sbjct: 2315 LAQYPDHALPLINLPQHQ----------------AYLIYTSGSTGKPKGVVVSHGEIAMH 2358
Query: 223 ISQIDKLFPLNAQDRVGQYSDLTFDLSVHDIFYSLISGACLYVVPELAKLSPAE----FI 278
+ + F + D + + FD + + L+SGA +VV AE I
Sbjct: 2359 CQAVIQRFGMRPDDCELHFYSINFDAATERLLVPLLSGA--HVVLRAQGQWDAEEICGLI 2416
Query: 279 HHHQLTVWLSVPTVIELALQRQTLTPHSLPSLRLSFFCGQALLHDLAEQWQQATQQPV-I 337
H++ + P+ Q +LP +R+ G+AL + ++ + A +
Sbjct: 2417 RQHRINILGFTPSYGSQLAQWLATQGQTLP-VRMCITGGEALTGEHLQRIRAAFNPSLFF 2475
Query: 338 NLYGPTECTI--AVTYHRFVAHSGMASVPIGRAFEEECLAIINEQGELMRFESAPEGYRG 395
N YGPTE + + G ASVPIG I++ L+ P G G
Sbjct: 2476 NAYGPTETVVMPLASLAPEQLEEGAASVPIGSVIGARMAYILDADLALV-----PPGATG 2530
Query: 396 ELLLSGKQLVKGYLNDPLNTQSAF----FQHEGRLWYRSGDIV-TKSNGVLIHLGRRDHQ 450
EL + G L +GY P T F F +G YR+GD+V +++G++ +LGR DHQ
Sbjct: 2531 ELYVGGAGLAQGYHQRPGMTAERFVADPFATDGGRLYRTGDLVRQRADGLVEYLGRIDHQ 2590
Query: 451 VKIAGQRVELEEIETVVRR---VTQAHSVAI-VPWPLSESGYASGTVAFVDTHTQWQ-PD 505
VKI G R+EL EIET + V +A +A+ P +GY VA D Q D
Sbjct: 2591 VKIRGFRIELGEIETRLLEHDAVREAVVLALDTPGGKQLAGYLVSDVASQDDGRQAALRD 2650
Query: 506 LWLSQCKQQLNPTFVPKRWYAIEQLPRNANGKTDIKAL 543
+ K QL VP + +P ANGK D +AL
Sbjct: 2651 ALKNHLKAQLPDYMVPTHLILLASMPLTANGKLDRRAL 2688
Score = 122 bits (305), Expect = 4e-31
Identities = 134/503 (26%), Positives = 215/503 (42%), Gaps = 49/503 (9%)
Query: 58 YQEMTDMALSLSDYWHLQGVQR---VAILSVRDLAAYSAIWASYLGGMTYIPLNARATTE 114
Y E+ A L+ Y +GV VAI + R + A G Y+PL+A E
Sbjct: 1153 YAELHAQANRLAHYLRDKGVGPDVCVAIAAERSPQLLIGVLAIIKAGGAYVPLDADYPAE 1212
Query: 115 QIQETLIATQCDSIMVDAQQLSRLSSLLETCIDRLHIYALPDVDVEPLRQQYPQHTFHTV 174
++ L + D ++ L RL + D + + A+ + +E Q+P +
Sbjct: 1213 RLAYMLDDSGVDLLLTQTALLERLPAC-----DGVSVIAMDALHLE----QWPSNP---- 1259
Query: 175 QITEQDVELLVVKYHLDNEHEYAYIMQTSGSTGKPKRIAVSYSNLHCYISQIDKLFPLNA 234
HL +H AY++ TSGSTG+PK + +++ L + + + L+A
Sbjct: 1260 -----------PGLHLHGDH-LAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATYGLDA 1307
Query: 235 QDRVGQYSDLTFDLSVHDIFYSLISGACLYVVPELAKLSP---AEFIHHHQLTVWLSVPT 291
D + Q + ++FD+SV + F+ LI+G+ L + P A+ + +T VP
Sbjct: 1308 IDVLMQKAPISFDVSVWECFWPLITGSQLVLAGPGEHRDPHRIAQLVQQFGVTTLHFVPP 1367
Query: 292 VIELALQRQTLTPHSLPSLRLSFFCGQALLHDLAEQ-WQQATQQPVINLYGPTECTIAVT 350
++ L + SLR F G+AL +L + Q + N YGPTE I VT
Sbjct: 1368 LLSLFVDEPLSA--RCTSLRRLFSGGEALPAELRNRVLAQLPSVQLHNRYGPTETAINVT 1425
Query: 351 YHRFVAHSGMASVPIGRAFEEECLAIINEQGELMRFESAPEGYRGELLLSGKQLVKGYLN 410
+ G S PIGR +++ P G GEL + G L +GYL
Sbjct: 1426 HWHCTEADGERS-PIGRPLGNVLCRVLDSD-----LNPVPAGVPGELCIGGLGLARGYLG 1479
Query: 411 DPLNTQSAF----FQHEGRLWYRSGDIVT-KSNGVLIHLGRRDHQVKIAGQRVELEEIET 465
P + F G YR+GD ++GV+ +LGR D QVK+ G RVE +EIE
Sbjct: 1480 RPGLSAERFVADPLGQAGARLYRTGDRARWNADGVIEYLGRLDQQVKLRGFRVEPQEIEA 1539
Query: 466 VVRRVTQAHSVAIVPWPLSESGYASGTVAFVDTHTQWQPDL---WLSQCKQQLNPTFVPK 522
+ VA++ S G + Q Q +L + +L VP
Sbjct: 1540 RLLAQDGVAQVAVLVRNTSAGPQLIGYYTAPEV-AQGQDELNTRLKAALAAELPDYMVPA 1598
Query: 523 RWYAIEQLPRNANGKTDIKALQQ 545
+ ++ +P + +GK D +AL +
Sbjct: 1599 QLLRLDVMPLSPSGKLDRRALPE 1621
Score = 55.5 bits (132), Expect = 4e-11
Identities = 69/312 (22%), Positives = 119/312 (38%), Gaps = 39/312 (12%)
Query: 193 EHEYAYIMQTSGSTGKPKRIAVSYSNLHCYISQIDKLF--PLNAQDRVGQYSDLTFDLS- 249
+ + A++ TSGST PK + VS+ NL I F LN D + + L D+
Sbjct: 160 DDDIAFLQYTSGSTALPKGVQVSHGNLVANELLIRHGFGIDLNPDDVIVSWLPLYHDMGL 219
Query: 250 VHDIFYSLISGA-CLYVVPELAKLSPA---EFIHHHQLTVWLSVPTVIELALQR---QTL 302
+ + + SG C+ + P P E I + T+ L +R L
Sbjct: 220 IGGLLQPVFSGVPCVLMSPAYFLARPLRWLEAISEYGGTISGGPDFAYRLCSERVSDSAL 279
Query: 303 TPHSLPSLRLSFFCGQALLHDLAEQWQQA------TQQPVINLYGPTECTI--------- 347
L R+++ + + D E++ + T + YG E T+
Sbjct: 280 QRLDLSGWRVAYSGSEPIRLDTLERFAEKFAPCGFTPDNFMASYGLAEATLFVAGTPRRH 339
Query: 348 ----------AVTYHRFVAHSGMASVPIGRAFEEECLAIINEQGELMRFESAPEGYRGEL 397
A+ +R G A + G + + I+ E + + GE+
Sbjct: 340 GIPSLRVDDAALAQNRAEPGQGSAVMSCGVSQPGHAVLIV----EPATAQPLADNQVGEV 395
Query: 398 LLSGKQLVKGYLNDPLNTQSAFFQHEGRLWYRSGDIVTKSNGVLIHLGRRDHQVKIAGQR 457
+G + GY +P + F QH+GR W R+GD+ +G L GR + + G
Sbjct: 396 WAAGPSIALGYWRNPEASAKTFVQHDGRTWLRTGDLGFLRDGELFITGRLKDLLIVRGHN 455
Query: 458 VELEEIETVVRR 469
+ ++IE + R
Sbjct: 456 LYPQDIEQAIER 467