Pairwise Alignments
Query, 556 a.a., lipid A modification system glycine--protein ligase AlmE from Vibrio cholerae E7946 ATCC 55056
Subject, 3154 a.a., Non-ribosomal peptide synthetase modules, pyoverdine?? from Pseudomonas fluorescens FW300-N2E2
Score = 150 bits (379), Expect = 7e-40
Identities = 136/507 (26%), Positives = 228/507 (44%), Gaps = 49/507 (9%)
Query: 53 QKTYTYQEMTDMALSLSDYWHLQGVQR---VAILSVRDLAAYSAIWASYLGGMTYIPLNA 109
+++ T+ ++ A L+ + QGV+ VA+ R L I A+ G ++PL+
Sbjct: 501 EQSLTFDQLNRAANRLARHLRAQGVKSDDLVAVFDERGLDLVVMIVATLKAGAGWLPLDP 560
Query: 110 RATTEQIQETLIATQCDSIMVDAQQLSRLSSLLETCIDRLHIYALPDVDVEPLRQQYPQH 169
R +++ + L ++ ++ A Q L +D L +Q PQ
Sbjct: 561 RNPPQRLAQVLRQSRTPLLIHSAGQ----GELAMEALDYL--------------EQRPQS 602
Query: 170 TFHTVQI-TEQDVELLVVKYHLDNEHEYAYIMQTSGSTGKPKRIAVSYSN-LHCYISQID 227
+ + + + L + H + AY + TSGSTG PK V+++ L+ + ++
Sbjct: 603 VLYDPAVLSSYSDDALNIPVH---DRSLAYCIFTSGSTGTPKGAMVAHAGMLNNILGKLP 659
Query: 228 KLFPLNAQDRVGQYSDLTFDLSVHDIFYSLISGACLYVVPELAKLSP---AEFIHHHQLT 284
L L+A D + Q + FD+SV L+ GA ++ + P A I H ++
Sbjct: 660 GL-GLDATDVIAQTAPQCFDISVWQTLAGLVLGARTVILGDCVVQDPEALASAIERHGIS 718
Query: 285 VWLSVPTVIELALQRQTLTPHSLPSLRLSFFCGQALLHDLAEQW-QQATQQPVINLYGPT 343
+ +VP++++ L SLR G+AL LA +W ++ P++N YGP
Sbjct: 719 ILEAVPSLMQSLLDAGL----ERSSLRWVLATGEALPPALARRWFERYPAIPLMNAYGPA 774
Query: 344 ECTIAVTYHRFVAH--SGMASVPIGRAFEEECLAIINEQGELMRFESAPEGYRGELLLSG 401
EC+ V +H + +VPIGRA L ++N + P G GE+ ++G
Sbjct: 775 ECSDDVAFHPLLERLPEQRTNVPIGRATLNNRLYLLNAD-----LQPIPAGAVGEIFVAG 829
Query: 402 KQLVKGYLNDPLNTQSAFFQ----HEGRLWYRSGDIVT-KSNGVLIHLGRRDHQVKIAGQ 456
+ +GY+ DP T + F ++G YR+GD+ NG L ++GR DHQVKI G
Sbjct: 830 VGVGRGYMADPARTAAVFLPDPIANDGSRLYRTGDLARFLPNGDLEYVGRTDHQVKIRGH 889
Query: 457 RVELEEIETVVRRVTQAHSVAIVPWPLSESGYASGTVAFVDTHTQWQPDLWLSQCKQQLN 516
R+EL+EIE + R +V + + VA+V Q + L
Sbjct: 890 RIELDEIEACLTRYPGVREAVVV--ARDDQQRSKVLVAYVVADAQASIEALREHVLGNLP 947
Query: 517 PTFVPKRWYAIEQLPRNANGKTDIKAL 543
P P + +E+ P N NGK D K+L
Sbjct: 948 PYMTPGAFVFLERFPLNGNGKIDRKSL 974
Score = 137 bits (345), Expect = 6e-36
Identities = 140/508 (27%), Positives = 212/508 (41%), Gaps = 51/508 (10%)
Query: 46 APALWVKQKTYTYQEMTDMALSLSDYWHLQGV---QRVAILSVRDLAAYSAIWASYLGGM 102
A A+ + +Y E+ A L+ GV RVA+ RD A+ A G
Sbjct: 1544 AVAVLAGNERLSYGELDQAAERLATALQAHGVGIEDRVALSLPRDARLPMAMLAILKAGA 1603
Query: 103 TYIPLNARATTEQIQETLIATQCDSIMVDAQQLSRLSSLLETCIDRLHIYALPDVDVEPL 162
Y+PL E+ + L A Q + A L+ L+ L D+D
Sbjct: 1604 AYVPLAEDTPPERGRYILEAAQPKLCLGTAASLAVLAQWNSGV-------PLLDIDAMSA 1656
Query: 163 RQQYPQHTFHTVQITEQDVELLVVKYHLDNEHEYAYIMQTSGSTGKPKRIAVSYSNLHCY 222
Y K + AY++ TSGSTG+PK +A+S NL
Sbjct: 1657 TDSY--------------------KAPASTAQQLAYVLYTSGSTGQPKGVAISRGNLMNL 1696
Query: 223 ISQIDKLFPLNAQDRVGQYSDLTFDLSVHDIFYSLISGACLYVVPELAKLSPA---EFIH 279
+ +D++ P+ A+DRV + TFD+++ ++ L GA + + P + +
Sbjct: 1697 MLAVDQVLPMTARDRVLALTTATFDIAIVELLLPLAHGASILLADREQARDPQAIDQLLM 1756
Query: 280 HHQLTVWLSVPTVIELALQRQTLTPHSLPSLRLSFFCGQALLHDLAEQWQQATQQPVINL 339
Q TV + P + + T S +R + G+AL LAE + + VIN
Sbjct: 1757 TGQPTVMQATPATWRMLVAH---TSRSWQGVR-AVSGGEALPCALAEAIEGRGAR-VING 1811
Query: 340 YGPTECTIAVTYHRFVAHSGMASVPIGRAFEEECLAIINEQGELMRFESAPEGYRGELLL 399
YGPTE T+ T+ VPIG+ +++ + G GEL L
Sbjct: 1812 YGPTEATVYSTFEVRSGGEAGVEVPIGQPVANTAAYVLDAD-----LQPVAAGVPGELYL 1866
Query: 400 SGKQLVKGYLNDPLNTQSAFFQH---EGRLWYRSGDIVTK-SNGVLIHLGRRDHQVKIAG 455
+G L +GY P T +AF G YR+GD V + S G L +LGR D QVK+ G
Sbjct: 1867 AGANLGRGYFAAPRLTAAAFLPDPFVPGARMYRTGDRVRRNSQGGLDYLGRLDFQVKLRG 1926
Query: 456 QRVELEEIETVVRRVTQAHSVAIVPWPLSESGYASGTVAFVDTHTQWQPDLWLSQCKQQL 515
R+EL EIE ++ R+ A+V L G + VA+ L QL
Sbjct: 1927 FRIELGEIEALLARIPGVREAAVV---LLGGGETASLVAYY-AGDPLDEALLRETLGAQL 1982
Query: 516 NPTFVPKRWYAIEQLPRNANGKTDIKAL 543
+P ++ ++ LP + +GK D KAL
Sbjct: 1983 PDYMLPSQFVRLDTLPLSPSGKVDRKAL 2010
Score = 114 bits (284), Expect = 8e-29
Identities = 126/517 (24%), Positives = 229/517 (44%), Gaps = 72/517 (13%)
Query: 46 APALWVKQKTYTYQEMTDMALSLSDYWHLQGV---QRVAILSVRDLAAYSAIWASYLGGM 102
A A+ + + +Y ++ ++ L+ + QGV + +A+ R + A + G
Sbjct: 2584 ALAVDCQDQQLSYAQLNALSNRLAHWLRAQGVGTDELIAVCLSRGPWLLPTLLAIHKAGA 2643
Query: 103 TYIPLNARATTEQIQETLIATQCDSIMVDAQQLSRLSSLLETCIDRLHIYALPDVDVEPL 162
Y+PL+ + ++++ + + ++ ++Q LS + +D+L + A
Sbjct: 2644 AYLPLDPQHPADRLRFIIEHARPALVLSESQCGDALSGVDNVWLDQLSLEAC-------- 2695
Query: 163 RQQYPQHTFHTVQITEQDVELLVVKYHLDNEHEYAYIMQTSGSTGKPKRIAVSYSNLHCY 222
D +L V N + AY++ TSGSTG PK + V+ NL
Sbjct: 2696 ---------------SADNLMLAV-----NPQQRAYVIYTSGSTGTPKGVQVTRENLSNL 2735
Query: 223 ISQIDKLFPLNAQDRVGQYSDLTFDLSVHDIFYSLISGACLYVVPELAKLSPAEFIHHHQ 282
++ +D+ PL+A D + FD+ ++F L++GA L + + + HQ
Sbjct: 2736 LAGLDRQLPLSAADVWLASTTYAFDMCKPELFLPLVNGAALLLARR------EQVVDGHQ 2789
Query: 283 L-------TVWLSVPTVIELALQRQTLTPHSLPSLRLSFFCGQALLHDLAEQWQQATQQP 335
L TV+ + P ++ L+ P +R G+A+ +L + ++
Sbjct: 2790 LFALLRRATVFQATPAGWQILLETGQA---DWPPVR-GLIGGEAVPGELVTE-LRSRGVV 2844
Query: 336 VINLYGPTECTI-AVTYHRFVAHSGMASVPIGRAFEEECLAIINEQGELMRFESAPEGYR 394
+IN YGPTE T+ + T SG+A IG +++E P G
Sbjct: 2845 LINAYGPTETTVWSTTQALQEVPSGVAD--IGSPLLNTRCYVLDEM-----LRPVPLGTT 2897
Query: 395 GELLLSGKQLVKGYLNDPLNTQSAFFQ-----HEGRLWYRSGDIV-TKSNGVLIHLGRRD 448
GEL ++G + +GY + T + + G YR+GD+V + +G L ++GR D
Sbjct: 2898 GELYIAGAGVTRGYQHAAAATAAVYLPDPYAGEPGSRMYRTGDLVRRRGDGRLAYVGRSD 2957
Query: 449 HQVKIAGQRVELEEIETVVRRVTQAHSVAIVPWPLSESGYA-SGTVAFVDTHTQWQPDLW 507
QVK+ G R+E EIE+++RR ++ P S+S +A + +D +
Sbjct: 2958 FQVKVRGFRIEPGEIESLIRRYPGVEEAVVMIDPRSQSLFAWLQAPSPID-------QVA 3010
Query: 508 LSQCKQQLNPTF-VPKRWYAIEQLPRNANGKTDIKAL 543
L + + L P + VP + +++ NANGK D KAL
Sbjct: 3011 LRRYLEGLLPGYMVPAGFIELQRFALNANGKIDRKAL 3047