Pairwise Alignments

Query, 556 a.a., lipid A modification system glycine--protein ligase AlmE from Vibrio cholerae E7946 ATCC 55056

Subject, 517 a.a., AMP-binding protein from Rahnella sp. WP5

 Score =  162 bits (410), Expect = 3e-44
 Identities = 145/521 (27%), Positives = 219/521 (42%), Gaps = 45/521 (8%)

Query: 36  ILAAIQANRHAPAL-W---VKQKTYTYQEMTDMALSLSDYWHLQGVQR----VAILSVRD 87
           ++A     RH P L W     ++ Y       M L++    H     R    V +   + 
Sbjct: 7   VIAIFMRFRHRPELAWCHGTHRRDYATLSQRAMDLAVQIRQHQTDTDRHVKPVLVYGHKS 66

Query: 88  LAAYSAIWASYLGGMTYIPLNARATTEQIQETLIATQCDSIMVDAQQLSRLSSLLETCID 147
               +A WA  L G   +P+ +  + E++++  +      ++       +++++      
Sbjct: 67  FDFIAAWWACLLCGCPVVPVESDNSPERVEKIALTLGAGLLLNTTATPVQMNAVRVLNTA 126

Query: 148 RLHIYALPDVDVEPLRQQYPQHTFHTVQITEQDVELLVVKYHLDNEHEYAYIMQTSGSTG 207
            ++     D  +  L  +  Q          QDV               AYIM +SG+TG
Sbjct: 127 EINGSVCTDATLHALLSESRQRL--------QDVP----------GEPLAYIMFSSGTTG 168

Query: 208 KPKRIAVSYSNLHCYISQIDKLFPLNAQDRVGQYSDLTFDLSVHDIFYSLISGACLYVVP 267
           +PK I ++  N+  +I  I + FPL+    V       FD+S+ +I+ + +    L V+ 
Sbjct: 169 EPKGIQITLRNMVNFIHWIREDFPLDGA--VTGNVRYCFDVSLFEIWLAWVFLQPLSVLD 226

Query: 268 ELAKLSPAEFIHHHQLT---VWLSVPTVIELALQRQTLTPHSLPSLRLSFFCGQALLHDL 324
               +S  + I  H  T    W+S P++I L L   T +   LP LR   FCG+ L  D+
Sbjct: 227 HRELISARKMIAQHAETGVVCWVSTPSIIRLYLLDPTFSAAQLPLLRRFIFCGETLTKDI 286

Query: 325 AEQ-WQQATQQPVINLYGPTECTIAVTYHRFVAH--SGMASVPIGRAFEEECLAIINEQG 381
             Q W +     VIN YGPTECT+AVT         S    +PIG A     L++     
Sbjct: 287 VTQLWTRFPDASVINTYGPTECTVAVTSVLITPEMISDPLPLPIGAARPGAVLSL----- 341

Query: 382 ELMRFESAPEGYRGELLLSGKQLVKGYLNDPLNTQSAFFQHEGRLWYRSGDIVTKSNGVL 441
                E   +  RGELL+SG  +  GYLN PL  Q+ F +H G+  Y +GDI        
Sbjct: 342 ----HEQESDSGRGELLISGTCVGPGYLNAPLKQQTQFIRHAGQNAYLTGDIGQAKGDCY 397

Query: 442 IHLGRRDHQVKIAGQRVELEEIETVVRRVTQAHSVAIVPWPLSESGYASGTVAFVDTHTQ 501
             LGR D +VKI G R++L EIE  +R       V  VP+     G A    A V  +  
Sbjct: 398 YFLGREDGEVKIQGHRIDLYEIEHFLRSQNLVSDVVAVPF--LRKGNAEAIQACVILNDS 455

Query: 502 WQPDLWLSQCKQQLNPTFVPKRWYAIEQLPRNANGKTDIKA 542
                     +    P  +P+ WYAI     N NGK D  A
Sbjct: 456 CALSALGHAMQAHFPPWSIPRYWYAIPHTILNHNGKLDRSA 496