Pairwise Alignments

Query, 556 a.a., lipid A modification system glycine--protein ligase AlmE from Vibrio cholerae E7946 ATCC 55056

Subject, 2166 a.a., colibactin non-ribosomal peptide synthetase ClbJ from Escherichia coli Nissle 1917

 Score =  159 bits (403), Expect = 8e-43
 Identities = 117/378 (30%), Positives = 188/378 (49%), Gaps = 30/378 (7%)

Query: 195  EYAYIMQTSGSTGKPKRIAVSYSNLHCYISQIDKLFPLNAQDRVGQYSDLTFDLSVHDIF 254
            + AYI+ TSGSTG PK + + +      +  I++ F LNAQDRV   S L+FDLSV+D F
Sbjct: 1688 DLAYIIFTSGSTGTPKGVMIDHRAAMNTLEDINERFGLNAQDRVFGLSSLSFDLSVYDAF 1747

Query: 255  YSLISGACLYVVPELAKLSPAE----FIHHHQLTVWLSVPTVIELALQRQTLTPHSLPSL 310
               + GA L V+PE  +          + H  ++VW +VP ++++  +  +    S P+L
Sbjct: 1748 APFMVGAAL-VLPEAGREKDPRHWQTVMAHGHVSVWNAVPALMQMLCEYHSGDRMSYPTL 1806

Query: 311  RLSFFCGQALLHDLAEQWQQATQQ--PVINLYGPTECTI-AVTYHRFVAHSGMASVPIGR 367
            RL+   G  +   L EQ ++   +   +I+L G TEC I +V Y      S   S+P GR
Sbjct: 1807 RLALLSGDWIPLTLPEQMRERLNETMDIISLGGATECAIWSVYYPIGEVESTWTSIPYGR 1866

Query: 368  AFEEECLAIINEQGELMRFESAPEGYRGELLLSGKQLVKGYLNDPLNTQSAFFQHE--GR 425
                + + ++N Q      E  P G  GE+ + G  L +GYLND   T ++F   E  G 
Sbjct: 1867 GLRNQPVYVLNAQ-----LEECPVGVEGEICIGGMGLAQGYLNDAEKTAASFVWREASGE 1921

Query: 426  LWYRSGDIVTK-SNGVLIHLGRRDHQVKIAGQRVELEEIETVVRRVTQAHSVAIVPWPLS 484
              YR+GD     ++G +  LGR D QVK+ G R+EL E+++ + ++    S A+V     
Sbjct: 1922 RIYRTGDRGRYFADGQVAFLGRNDTQVKVNGYRIELGEVKSHLEQLDSVGSAAVV----- 1976

Query: 485  ESGYASGTVAFVDTHTQWQPD-------LWLSQCKQQLNPTFVPKRWYAIEQLPRNANGK 537
               +     AF+       PD          +Q   QL    +P+ ++ ++ LP   NGK
Sbjct: 1977 --CHQGQLYAFITAAENLHPDDTDALLARVRAQLAVQLPYYLLPQHFFLLKVLPMTGNGK 2034

Query: 538  TDIKALQQQLASQTYETS 555
             D  A+ Q++  +  +++
Sbjct: 2035 IDQAAMVQEVIQRMSQST 2052



 Score =  121 bits (303), Expect = 3e-31
 Identities = 133/540 (24%), Positives = 224/540 (41%), Gaps = 94/540 (17%)

Query: 44  RHAPALWVKQK--TYTYQEMTDMALSLSDYWHLQGVQ---RVAILSVRDLAAYSAIWASY 98
           +H   L ++Q   T TY E+      ++  +   G+Q   R+ +L  R     + + A++
Sbjct: 513 QHPKQLAIQQHDGTLTYAELWARVQFIAMRFRAHGIQPGDRIGVLLPRHRDVIATMLATW 572

Query: 99  LGGMTYIPLNARATTEQIQETLIATQCDSIMVDAQQLSRLSSLLETCIDRLHIYALPDVD 158
             G  Y+P +      ++Q  +   +   ++V  +Q      +++  +  L    + D+ 
Sbjct: 573 FVGACYVPFDIHQPAARLQRLMQRARLVCLVV--RQPGEWGEIVQLSLPEL----MQDMS 626

Query: 159 VEPLRQQYPQHTFHTVQITEQDVELLVVKYHLDNEHEYAYIMQTSGSTGKPKRIAVSYSN 218
              +R   P      +Q                     AY++ TSGSTG+PK + V +  
Sbjct: 627 -NAIRYSTPCALLPDMQ---------------------AYLLFTSGSTGEPKGVCVVHRG 664

Query: 219 LHCYISQIDKLFPLNAQDRVGQYSDLTFDLSVHDIFYSLISGACLY------------VV 266
           L   +  + + F + +QDR+   +  TFD+S  +    LISGA LY            ++
Sbjct: 665 LLNLLLDMQRTFAVGSQDRLLSVTTPTFDISFLEYLLPLISGASLYLTEAERAADSFRMI 724

Query: 267 PELAKLSPA------EFIHHHQLTVWLSVPTVIELALQRQTLTPHSLPSLRLSFFCGQAL 320
           P +A   P        F H   +  W   P +  LA                    G+AL
Sbjct: 725 PLIADYRPTLMQATPSFWHGLLMAGWRGDPELCVLA-------------------GGEAL 765

Query: 321 LHDLAEQWQQATQQPVINLYGPTECTIAVTYHRFVAHSGMASVPIGRAFEEECLAIINEQ 380
              +AE+  +     + NLYGPTE TI     +    +   ++ +G       + I++ +
Sbjct: 766 PTKVAEELLRCCGS-LWNLYGPTETTIWSLKSQI---TQAENITLGAPIANTRIYILDNE 821

Query: 381 GELMRFESAPEGYRGELLLSGKQLVKGYLNDP-LNTQSAFFQHE----GRLWYRSGDIV- 434
           G        P+G  GEL ++G  + +GY   P LN Q  FF  E    G   +R+GD+V 
Sbjct: 822 G-----HPVPQGVDGELYIAGDGVAQGYDGQPELNAQ--FFLSEPGVPGGRMFRTGDLVR 874

Query: 435 TKSNGVLIHLGRRDHQVKIAGQRVELEEIETVVRRVTQAHSVAIVPWPLSESGYASGTVA 494
           + + G L  +GR+D Q+K+ G R+EL EIE  + R    H  A V   +  +       A
Sbjct: 875 SDAQGQLFFVGRKDSQIKLRGYRIELGEIERTLAR--HPHVDAAVVACIERAPLHKALAA 932

Query: 495 FVDTHTQWQPDLW---LSQCKQQLNPTFVPKRWYAIEQLPRNANGKTDIKALQQQLASQT 551
           F+ T     P L+    ++ +QQL    VP  W  +   P   NGK D K L +   + +
Sbjct: 933 FIITSE--PPSLFEQLKNELRQQLPDYMVPTLWQRVADFPNTDNGKIDRKRLAENFVADS 990