Pairwise Alignments

Query, 461 a.a., class II fumarate hydratase from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., Fumarate hydratase class II (EC 4.2.1.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  393 bits (1010), Expect = e-114
 Identities = 221/459 (48%), Positives = 291/459 (63%), Gaps = 6/459 (1%)

Query: 6   RIEKDSMGEVKVPADALYQAQTQRAVDNFTLSRYTMPSAFIAALAYIKQAAAMTNAQLGH 65
           RIE DS+G+V+VP DA + AQTQR++ NF +    MP + + ALA IK+AAA  N + G 
Sbjct: 3   RIETDSLGQVEVPDDAYWGAQTQRSMINFAIGNERMPLSVLHALALIKKAAARVNDRNGD 62

Query: 66  LEGDIAQAIANASQAVIDGQYAKQFPIDVFQTGSGTSSNMNANEVIATLASRELGYA--- 122
           L  DIA+ I  A+  V+ GQ+  QFP+ V+QTGSGT SNMN NEVIA  A+   G     
Sbjct: 63  LPADIARLIEQAADEVLAGQHDDQFPLVVWQTGSGTQSNMNVNEVIAGRANELAGNPRGG 122

Query: 123 ---VSPNDHVNMGQSSNDVIPTAIQVSAAINIEQQLLPALAHLSQTLADKQSELADVVKT 179
              V PNDHVN  QSSND  PTA+ ++AA  + QQL PA++ LS  LA+  +    +VKT
Sbjct: 123 KSPVHPNDHVNRSQSSNDCFPTAMHIAAAQAVHQQLFPAISELSGGLAELAARHMKLVKT 182

Query: 180 GRTHLMDAMPVTFAQELGGWKSQIDHAAQGISHALSPIKALAQGGTAVGTGINADPRFAR 239
           GRTH+MDA P+TF QEL  + +Q+D+A + I  AL  +  LAQGGTAVGTG+N+   F  
Sbjct: 183 GRTHMMDATPITFGQELSAFIAQLDYAERAIRAALPAVCELAQGGTAVGTGLNSPHGFGE 242

Query: 240 IFADNLSQLSHVAFQPSDNFFYNLSSQDCVVGLSGQLKTAAVALMKIANDLRWMNSGPLA 299
             A  L+ LS + F  + N F  L+  + +  LSG LKT AV LMKIANDLR + SGP A
Sbjct: 243 AIAAELAALSGLPFVTAPNKFAALAGHEPLTALSGALKTLAVTLMKIANDLRLLGSGPRA 302

Query: 300 GLGEIELQGLQPGSSIMPGKVNPVIPEAVTMVAAQVIGNDTTITVAGQSGNFQLNVMLPV 359
           G  E++L   +PGSSIMPGKVNP   EA++M+A QV+GND TI  A   G+ QLNV  PV
Sbjct: 303 GFAEVKLPANEPGSSIMPGKVNPTQCEALSMLACQVMGNDVTIGFAASQGHLQLNVFKPV 362

Query: 360 IAHNLLESIELLTNACHALADKAIATFKVRHDNLEKALAKNPILVTALNPVIGYLKAADI 419
           I HNLL+SI LL + C       IA  +   + +   L +  +LVTALNP IGY K+A+I
Sbjct: 363 IIHNLLQSIRLLADGCSNFQQHCIAGLEPDAEQMAAHLERGLMLVTALNPHIGYDKSAEI 422

Query: 420 AKKAYQQGRAILDVAAEETDLDRATLEALLDPKKLTQGG 458
           AKKAY +G  + + A +   L     +A + P+ + + G
Sbjct: 423 AKKAYGEGLTLREAALQLGYLTDEEFDAWVRPENMLEAG 461