Pairwise Alignments

Query, 461 a.a., class II fumarate hydratase from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., Fumarate hydratase, class II from Pseudomonas syringae pv. syringae B728a

 Score =  396 bits (1017), Expect = e-115
 Identities = 222/459 (48%), Positives = 290/459 (63%), Gaps = 6/459 (1%)

Query: 6   RIEKDSMGEVKVPADALYQAQTQRAVDNFTLSRYTMPSAFIAALAYIKQAAAMTNAQLGH 65
           R E DS+G ++VP DA + AQTQR++ NF +    MP   + AL  IK+AAA  N + G 
Sbjct: 3   RTETDSIGPIEVPEDAYWGAQTQRSLINFAIGDQRMPLPVLHALTLIKKAAARVNDRNGD 62

Query: 66  LEGDIAQAIANASQAVIDGQYAKQFPIDVFQTGSGTSSNMNANEVIATLASRELGYA--- 122
           L  DIA+ I  A+  V+DGQ+  QFP+ V+QTGSGT SNMN NEVIA  A+   G     
Sbjct: 63  LPADIARLIEQAADEVLDGQHDAQFPLVVWQTGSGTQSNMNVNEVIAGRANELAGQGRGG 122

Query: 123 ---VSPNDHVNMGQSSNDVIPTAIQVSAAINIEQQLLPALAHLSQTLADKQSELADVVKT 179
              V PNDHVN  QSSND  PTA+ ++ A  ++ QLLPA+A LS  LA++ +    +VKT
Sbjct: 123 KSPVHPNDHVNRSQSSNDCFPTAMHIATAQAVKAQLLPAIAELSSGLAEQAARHMKLVKT 182

Query: 180 GRTHLMDAMPVTFAQELGGWKSQIDHAAQGISHALSPIKALAQGGTAVGTGINADPRFAR 239
           GRTH+MDA P+TF QEL G+ +Q+D+A + I  AL  +  LAQGGTAVGTG+NA   FA 
Sbjct: 183 GRTHMMDATPITFGQELSGFVAQLDYAEKAIRAALPAVYELAQGGTAVGTGLNAPKGFAE 242

Query: 240 IFADNLSQLSHVAFQPSDNFFYNLSSQDCVVGLSGQLKTAAVALMKIANDLRWMNSGPLA 299
             A  L+ LS + F  + N F  L+  + +  LSG LKT A  LMKIANDLR + SGP A
Sbjct: 243 AIAAELAALSGLPFVTAPNKFAALAGHEPLAALSGALKTLAGTLMKIANDLRLLGSGPRA 302

Query: 300 GLGEIELQGLQPGSSIMPGKVNPVIPEAVTMVAAQVIGNDTTITVAGQSGNFQLNVMLPV 359
           GL E+ L   +PGSSIMPGKVNP   EA++M+A QV+GND TI  A   G+ QLNV  PV
Sbjct: 303 GLAEVRLPANEPGSSIMPGKVNPTQCEALSMLACQVMGNDVTIGFAASQGHLQLNVYKPV 362

Query: 360 IAHNLLESIELLTNACHALADKAIATFKVRHDNLEKALAKNPILVTALNPVIGYLKAADI 419
           I HN+L+SI LL + C    +  IA  +   + + + L +  +LVTALNP IGY K+A I
Sbjct: 363 IIHNVLQSIRLLADGCSNFNEHCIAGMEPDGEKMAEHLERGLMLVTALNPHIGYDKSAQI 422

Query: 420 AKKAYQQGRAILDVAAEETDLDRATLEALLDPKKLTQGG 458
           AKKAY +G  + + A     L     +A + P K+ + G
Sbjct: 423 AKKAYTEGLTLREAALALGYLTDEEFDAWVRPDKMLEAG 461