Pairwise Alignments

Query, 461 a.a., class II fumarate hydratase from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., class II fumarate hydratase from Rhodopseudomonas palustris CGA009

 Score =  352 bits (904), Expect = e-101
 Identities = 196/461 (42%), Positives = 268/461 (58%), Gaps = 6/461 (1%)

Query: 6   RIEKDSMGEVKVPADALYQAQTQRAVDNFTLSRYTMPSAFIAALAYIKQAAAMTNAQLGH 65
           R E DSMG V VPAD  + AQTQR++ +F++    MP A   A  Y+K+A A+ N   G 
Sbjct: 23  RREFDSMGSVDVPADRYWGAQTQRSLQHFSIGGDRMPKAVYHAYGYVKKACALVNHAAGR 82

Query: 66  LEGDIAQAIANASQAVIDGQYAKQFPIDVFQTGSGTSSNMNANEVIATLASRELG----- 120
           L     +AI  A+   I G     +P+ V+QTGSGT SNMN NEV++  A + LG     
Sbjct: 83  LPAWKTEAIVRAADETISGALDDHYPLFVWQTGSGTQSNMNVNEVVSNRAIQLLGGTLGT 142

Query: 121 -YAVSPNDHVNMGQSSNDVIPTAIQVSAAINIEQQLLPALAHLSQTLADKQSELADVVKT 179
              V PND VNMGQSSND  PTA+ ++A   I+ Q++P L+ L + +  K     DVVK 
Sbjct: 143 QQPVGPNDDVNMGQSSNDTFPTAMHIAAVTAIDDQVVPRLSKLIEIIEQKADGWMDVVKI 202

Query: 180 GRTHLMDAMPVTFAQELGGWKSQIDHAAQGISHALSPIKALAQGGTAVGTGINADPRFAR 239
           GRTHL DA+P+T  QE  GW  Q+  A   I  + + +  LA GGTAVGTG+NA   FA 
Sbjct: 203 GRTHLEDAVPLTVGQEWHGWAGQLRDARDAIEASRAGLYQLAVGGTAVGTGLNAPKGFAA 262

Query: 240 IFADNLSQLSHVAFQPSDNFFYNLSSQDCVVGLSGQLKTAAVALMKIANDLRWMNSGPLA 299
             A  +++L+   F  + N F    S D +V   G L+  AVALMKIAND+RW+ SGP  
Sbjct: 263 DVAARIAELTGKPFVTAPNKFAAQGSLDAMVRAHGALRDLAVALMKIANDMRWLASGPRC 322

Query: 300 GLGEIELQGLQPGSSIMPGKVNPVIPEAVTMVAAQVIGNDTTITVAGQSGNFQLNVMLPV 359
           G GE+ L   +PGSSIMPGKVNP   EA+ M+  QV+GND+ +  AG  GNF+LN M PV
Sbjct: 323 GFGELLLPSNEPGSSIMPGKVNPTQCEAMVMICIQVMGNDSAVAFAGSQGNFELNAMRPV 382

Query: 360 IAHNLLESIELLTNACHALADKAIATFKVRHDNLEKALAKNPILVTALNPVIGYLKAADI 419
           I +N L S  +L + C      ++   ++  D + + +  + +LVTAL+PVIGY  AA I
Sbjct: 383 IINNFLHSARILADGCEKFRTYSVEGTELNRDRVAQYVEGSVMLVTALSPVIGYQNAAHI 442

Query: 420 AKKAYQQGRAILDVAAEETDLDRATLEALLDPKKLTQGGIA 460
           A+ A  +   +   A     +D AT + ++ P  +   G+A
Sbjct: 443 AEDAIAKNLTLKQAALASGKVDEATFDRIVRPIDMVGSGLA 483